Pairwise Alignments

Query, 963 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Pseudomonas stutzeri RCH2

Subject, 978 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 1140 bits (2949), Expect = 0.0
 Identities = 589/978 (60%), Positives = 743/978 (75%), Gaps = 15/978 (1%)

Query: 1   MPNGMKRAFTGVALVLICYSLLGFLILPGIAQRVANQQLANYATVPANLQRIEFNPFSLE 60
           M  G+ RA   +  ++  YSLLGFLILPG+A R+ANQQLA YATVPA+L+RIE NPFSLE
Sbjct: 1   MYKGLTRAAGAIVALVALYSLLGFLILPGVALRIANQQLAQYATVPAHLERIELNPFSLE 60

Query: 61  LSLIDLRIGEPDDRQLAFERLYLDLQWDSLWQRTLHLAAVELWAPYVEARFARDGALNLG 120
           L+L  L+IGEP   Q+ FERLY +   DSLW + LHL AVEL  P  E  FA+DG LNL 
Sbjct: 61  LTLWGLQIGEPGKEQVGFERLYANASLDSLWTKALHLEAVELDKPRNEVLFAKDGTLNLT 120

Query: 121 QLFEVPEAEPTTSEA-GELFPLRIDRLQLMRGHLGFEDKRPSEPIVLIYDSLDFELHNLA 179
            LF++P +E    E   + FPLRI  ++L+ G+L FED RPSEPI  +YD+++ EL NL+
Sbjct: 121 GLFKLPASEAKPEEPPSDPFPLRIGSIKLIDGYLHFEDLRPSEPIEFLYDNMNLELKNLS 180

Query: 180 TRSDGSADARLTASGASGGRIDWQGDLSLQPLASRGSLQVSKLQLKDFWPYVRDAAPLEL 239
           T  + +AD  L ASG +GGRIDW+G LSL P+AS G+L+V+  ++K FWPYVRDA PL L
Sbjct: 181 TLPNDNADMTLVASGPNGGRIDWKGTLSLSPIASEGTLKVTDGKMKLFWPYVRDAVPLVL 240

Query: 240 KDGSLELSTGYRLALDDGFTLTLDNASAAAAQLALDSPDGRKLVRLERLELSETALDLAK 299
           +DG + L T Y+L L     L LDN S   A  A+ +PDGR L RL  LE+SET++DL K
Sbjct: 241 EDGVVSLDTHYKLNLAKQTELLLDNVSVRIAPFAIKAPDGRPLARLASLEVSETSIDLVK 300

Query: 300 QQVIIGKLRSRNLETWAAREADGELDWQKLFASAPAKAD--------ASKATAEEQA-RP 350
           QQV +GK+RS  LETWAA E DG+LDWQKLFAS P KA         A++ T EE+A + 
Sbjct: 301 QQVTVGKVRSEKLETWAALEKDGQLDWQKLFASQPTKATPKEKAEPAAAEPTPEEKAAKE 360

Query: 351 AGEPWQVLLRDAQLRDYRVHLADRVPDEEVELALGPLNLDVRDFDSLGNSPFALKLDTGI 410
             +PWQVLL+D QLR+Y VHLADR   E V L +GPLN D++ FDSL  SPF LKLDTG+
Sbjct: 361 PSKPWQVLLKDVQLRNYLVHLADRSQKEPVALDIGPLNADLQGFDSLNQSPFTLKLDTGV 420

Query: 411 GKQGAVQASGQLQLSPMSGKLAVTTRDIDLRIAQAYLSPLVHLELRSGMLASELDIDLLG 470
           GKQG +QA+GQ+ L+P+  KL V+TRDIDLR+AQAY+SP + LELRSGML+S+L +DL  
Sbjct: 421 GKQGKLQAAGQVNLAPIWAKLDVSTRDIDLRVAQAYISPFILLELRSGMLSSDLKVDLKN 480

Query: 471 TEPLAFSVRGSVDATQLHTLDTINNRDFIKWQRLQLSGLDYRHPSSLAIDHIDLSQPYAR 530
           T PLAF+V G    +QLHTLDTI +RDF+KWQ++ + GL Y H  +L+ID + L QPYAR
Sbjct: 481 TAPLAFNVTGKAQVSQLHTLDTIKSRDFVKWQQVNVDGLSYVHGDALSIDKVTLLQPYAR 540

Query: 531 FIINPDLSTNINDLLVERSDPASAAAE-QPTPAS--EPLAIRIGGIGIANGSANFADFSL 587
           FIIN D +TN+NDLL+ +   A A+++ +PT AS  +PL I IG I I +GSANFAD SL
Sbjct: 541 FIINEDRTTNVNDLLIPQPADAPASSQPKPTTASNNKPLGIHIGQIDINDGSANFADLSL 600

Query: 588 RPPFVTAIQSLNGEIGTLDNREQKAASVNITGKVDQYAPVSIKGNLTPFDPLQSLDIATS 647
            P F TAIQ LNG+IGT+DNR+ + A V++ GKVD+YAPV+IKG L PF+PL SLDIATS
Sbjct: 601 TPNFATAIQQLNGQIGTIDNRKPQPAKVDVKGKVDRYAPVTIKGALNPFNPLASLDIATS 660

Query: 648 FRQVELTTLTPYSGKFAGYRIRKGRLNLDLHYRIEQGRLNAENKVVLEQLQLGEKVDSPD 707
           F++VELTTLTPYSGKFAG+RIRKGRLNLDLHY I  G+L AENKVV+EQLQLGEKVDSPD
Sbjct: 661 FKRVELTTLTPYSGKFAGFRIRKGRLNLDLHYLITNGQLKAENKVVVEQLQLGEKVDSPD 720

Query: 708 AVDLPVRLAVALLKDSKGTISIELPVQGNLNDPQFSVMPIVWQTLRNLVVRAAQAPFKFI 767
           AVDLP+RLAVALLKD++G ISIELPV G+LN+PQFSVMPIVWQTLRNLV+RAAQAPFKFI
Sbjct: 721 AVDLPIRLAVALLKDTEGKISIELPVSGDLNNPQFSVMPIVWQTLRNLVLRAAQAPFKFI 780

Query: 768 AGL-AGGDDTDLSHIGFEPASSTLDGEARKVLDTLASALKQRPGLRLEVEGMSAGAIDGP 826
            GL +GG   DL ++ F P SS L GEA+  LD LASALK+RP LRLE+EG SA A DGP
Sbjct: 781 GGLISGGSSEDLGNVAFAPGSSELSGEAQSSLDKLASALKERPELRLEIEGTSAQASDGP 840

Query: 827 LLAEQRLQQEYRETQYRILQRRGDKVPADPSLIRIEAEDEAPLLEGIYRSRLGHQPPSAW 886
           L+A+QRL++EY+ T Y+ILQRRGDKVPA+ S++ ++  D+  +LEGIYR+RL  QPP+ W
Sbjct: 841 LIAQQRLEREYQATWYKILQRRGDKVPANASMLVVDDSDKPAMLEGIYRTRLKQQPPAEW 900

Query: 887 AELDAEQRTQQMRQAVLESWADNAALLRRLSRDRAAAIKGYLVDAG-LDSERVYLLDTGT 945
            +L  ++R  ++R+AV++SWA++ ALLR L ++RA++IK YLVD G L+ +RVY +DT  
Sbjct: 901 EQLGRDERAAKLREAVIKSWAESTALLRTLGQERASSIKDYLVDKGKLEDDRVYFIDTSL 960

Query: 946 AEQPSDGKVVTALHLGSD 963
            +  SDG+VVT +HL ++
Sbjct: 961 GQPQSDGRVVTPMHLDAE 978