Pairwise Alignments

Query, 305 a.a., tRNA pseudouridine 55 synthase from Pseudomonas stutzeri RCH2

Subject, 305 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score =  504 bits (1299), Expect = e-148
 Identities = 252/305 (82%), Positives = 275/305 (90%)

Query: 1   MAQVKRVRRNVNGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG 60
           MAQVKR+RRNV+GIILLDKP GFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
Sbjct: 1   MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG 60

Query: 61  EATKFSQYLLDADKAYETVMQLGVTTTTADAEGEVLERKPVAVTVEQLEALLPQFRGDIL 120
           EATKFSQYLLD+DK YET+MQLG TTTTADAEG+VL+ + V V    +EA+LP FRG+I 
Sbjct: 61  EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAVLPGFRGEIS 120

Query: 121 QVPPMYSALKRDGQPLYKLARAGEVVEREPRSVNIARLELLSLEGDKARLAVSCSKGTYI 180
           Q+PPMYSALKRDGQPLYKLARAGEVVEREPRSV IARLELL+ EGD ARLAV CSKGTYI
Sbjct: 121 QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI 180

Query: 181 RTLVEDLGHLLGCGAHVAELRRTQAGPFDLSQTVTLETLEQLHSEGGAEALDALLQPVDS 240
           RTLVED+G  LGCGA+VAELRRTQAGPF L+QTVTLE LE +H+EGG EA+D  L P DS
Sbjct: 181 RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS 240

Query: 241 GLEHWPLLQLSEHSAYYWLHGQPVRAPEAPKYGMVRVQDNNGRFIGIGEVSEDGRIAPRR 300
           GL  WPLL  SEHSA+YWL+GQPVRAP+APK+GMVRVQD+NGRFIGIGEVSEDGRIAPRR
Sbjct: 241 GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR 300

Query: 301 LIRSE 305
           LIRSE
Sbjct: 301 LIRSE 305