Pairwise Alignments

Query, 382 a.a., carbamoyl-phosphate synthase, small subunit from Pseudomonas stutzeri RCH2

Subject, 399 a.a., Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) from Variovorax sp. SCN45

 Score =  498 bits (1281), Expect = e-145
 Identities = 252/388 (64%), Positives = 296/388 (76%), Gaps = 8/388 (2%)

Query: 3   KPALTPAILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYP 62
           K +  PAILALADG++F+G SIGA G T GEVVFNTAMTGYQEILTDPSY +QIVTLTYP
Sbjct: 6   KGSFPPAILALADGTVFQGNSIGAAGSTTGEVVFNTAMTGYQEILTDPSYCQQIVTLTYP 65

Query: 63  HVGNTGTTPEDAESWKVWAAGLVIRDLPLISSNWRDKQPLPDYLKANGTVAIAGIDTRRL 122
           H+GN G   ED E+ K+ AAGL+I+DLPL++SN+R    L +YL +  TVAIA IDTR+L
Sbjct: 66  HIGNYGVNGEDIEADKIHAAGLIIKDLPLVASNFRKTATLTEYLVSGNTVAIANIDTRKL 125

Query: 123 TRILREKGAQNGCILA---GSDATE---EKALELARSFPGLKGMDLAKEVSVKERYEWRS 176
           TR LR  GAQNGCIL    G   T+   +KA+  A++ P + G+DLAK VSV + YEW  
Sbjct: 126 TRHLRTHGAQNGCILGLAEGETVTQALIDKAIAAAKAAPSMAGLDLAKVVSVTQTYEWTE 185

Query: 177 SVWCLKD-DGHAEIPASELP-YHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALA 234
           + W L + +G         P +HVVAFDYGVK NILRM+  RG R+TV+PAQTPA++ L 
Sbjct: 186 TEWKLVNLNGKPGYGVQITPKFHVVAFDYGVKKNILRMIAQRGARITVVPAQTPAADVLK 245

Query: 235 LNPDGIFLANGPGDPEPCDYAIKAIQEVLETDIPVFGICLGHQLLALASGAKTVKMPNGH 294
           L PDGIFLANGPGDPEPCDYAI A++E++ET IP FGICLGHQ++ALASGAKT KM  GH
Sbjct: 246 LKPDGIFLANGPGDPEPCDYAISAVKELIETGIPTFGICLGHQIMALASGAKTFKMKFGH 305

Query: 295 HGANHPVQDLKTGVVMITSQNHGFAVDEASLPANVRATHKSLFDGTLQGIERTDKAAFSF 354
           HGANHPV+DL  G V ITSQNHGFAVDE SLPAN+R TH SLFD TLQG+ RTDK AF F
Sbjct: 306 HGANHPVKDLDNGRVSITSQNHGFAVDEKSLPANLRPTHVSLFDNTLQGLARTDKPAFCF 365

Query: 355 QGHPEASPGPHDVAPLFDRFIETMAKRR 382
           QGHPEASPGPHD+  LFDRF   M K +
Sbjct: 366 QGHPEASPGPHDIGYLFDRFTALMEKHK 393