Pairwise Alignments

Query, 376 a.a., chaperone protein DnaJ from Pseudomonas stutzeri RCH2

Subject, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

 Score =  172 bits (435), Expect = 1e-47
 Identities = 116/355 (32%), Positives = 170/355 (47%), Gaps = 71/355 (20%)

Query: 4   RDFYEVLGVERGVSEAELKKAYRRLAMKHHPDRNPGDKAAEEAFKEANEAYEVLSDPSKR 63
           +D+Y++LGVE    E  +K AYR+LA K+HPD +  ++ AEE FKEANEAYEVL D  KR
Sbjct: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDAQKR 62

Query: 64  AAYDQYGHAG--------VDPQMGAGAAGAGYGGANFSDIFGDVFSDFFSGGRGGG---- 111
           A +D+    G          P   +   G G+ G +FSD F  +F    +GG   G    
Sbjct: 63  AEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGARQ 122

Query: 112 --RGGAQRGSDLRYTLELDLEEAVRGTTVTIRVPTLVECKICDGSGAKKGTSPVTCTTCG 169
             R   +RG D+   L + LEE +   +  I                             
Sbjct: 123 QQRSAGRRGQDVELELAVFLEETLSKESKQIS---------------------------- 154

Query: 170 GIGQVRMQQGFFSVQQTCPRCHGSGKMISDPCGSCHGQGRVEEQKTLSVKVPPGVDTGDR 229
                      F V QT                +  GQ      KTL+V++P GV  G+R
Sbjct: 155 -----------FQVPQT----------------NAMGQRTGFTTKTLNVRIPAGVTDGER 187

Query: 230 IRLSGEGEAGTQGGPAGDLYVVVNVREHAIFQRDGKHLYCEVPISFADAALGGELEVPTL 289
           IRL G+G  G+ GG  GDL++ + +  H +F  +G  L   VP++  +AALG ++ VPTL
Sbjct: 188 IRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAKVAVPTL 247

Query: 290 DGRVKLKIPEGTQTGKQFRLRGKGVAPVRGGAAGDLMCRVVVETPVNLSKRQREM 344
           DG++ L I   +Q+G++ R+ GKG+A  + G  G+L  ++ V  P    +  RE+
Sbjct: 248 DGKINLTIRPDSQSGQRLRVPGKGLAN-KQGERGNLYAQLKVVMPPASDESAREL 301