Pairwise Alignments

Query, 259 a.a., ABC-type proline/glycine betaine transport systems, periplasmic components from Pseudomonas stutzeri RCH2

Subject, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 16/256 (6%)

Query: 5   IRLGYID--LSFHAASAALVQRVLERHDYEVQVSAAPHEDMFRRYGAGAVDMLASAWLPA 62
           + +GY+D      A +    + + ++  Y+V++ A     M++    G +D + SAWLP 
Sbjct: 32  VSIGYVDGWADSVATTNVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDAMLSAWLPV 91

Query: 63  SHGDYLAPYAAQTRTLGVLYRPYCI-WGVPDYVPVDAVQSVADLLRPEVATRMTRLIQGI 121
           +HG+Y A         G  ++   I   VP+YV      S+ADL   +        I GI
Sbjct: 92  THGEYWAKNKDNVVDYGPNFKDAKIGLIVPEYV---KAVSIADL---KTDNSFKDRIVGI 145

Query: 122 NPGAGISRFSRAIVQQYGLDRLGYHFENGTQADCFVRYEQAHARREWCVVPLWHPQFLHH 181
           + G+G+   +   ++ YGL    Y  +  + A       +A+A+++   V  W P ++  
Sbjct: 146 DAGSGVMLKTDQAIKDYGL--TSYKLQASSGAAMTAELGRAYAKQQSIAVTGWVPHWMFA 203

Query: 182 SHRIRPLDEPLGLLGGQDDATLIVSEPFARDMP--AALLEELNRLSPGNEVISELDHSIC 239
             +++ L++P G+ G  +    I S+  A   P  A  L++ N  S   + I E+  +I 
Sbjct: 204 KWKLKFLEDPKGVYGAAETVNSIGSKELATKAPEVAEFLKKFNWQS--KDEIGEVMLAI- 260

Query: 240 RDGMSALQAADAWLAR 255
           ++G     AA  W+A+
Sbjct: 261 QEGAKPEAAAKDWVAK 276