Pairwise Alignments

Query, 318 a.a., Permeases of the drug/metabolite transporter (DMT) superfamily from Pseudomonas stutzeri RCH2

Subject, 301 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  107 bits (266), Expect = 5e-28
 Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 11/287 (3%)

Query: 32  LLLAILVWGANWPVMKAGLGHVTPVWFSASRFALGALCLFLLQLLTGTLYRPSRGDVPLL 91
           L++  L+W  +W  MK    ++    F+A R   GAL LF++ LL G   RP+       
Sbjct: 15  LVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMRPT--PFKYT 72

Query: 92  LSVGLLQMLAFTLLGALAMTDIPAGRSAVLAYTTPLWVTPLAVLVFRERLVPRQLLGAAL 151
           L++ LLQ      L   A+    AG+ A+L+YT P WV   A L   ERL   Q     +
Sbjct: 73  LAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAILI 132

Query: 152 GMFGVAVLFNPLTLDWNNASLVRANLMLLIASACW---ALCILHLRYAKVRATAYQLAPW 208
             FG+ ++  P  LD+   S +++ ++ +++   W   A+    L     R     L  W
Sbjct: 133 AAFGLFLVLQPWQLDF---SSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSW 189

Query: 209 QMLVATVPLLALARIVEGPFTGDGSVAFWQIILFVGPLATAFCFCAVNAASMWLPATSMS 268
           QML A + +  +A +V           FW  + +   LATA  +         LPA+  S
Sbjct: 190 QMLYAALVMSVVALLVPQREIDWQPTVFW-ALAYSAILATALAWSLWLFVLKNLPASIAS 248

Query: 269 LAMLGVPLVGLMSSVFWLGETLSASLIAGVLAISAGVLLAIVKTRAK 315
           L+ L VP+ G++ S + LGE   A   +G++ I   + LA+V  + K
Sbjct: 249 LSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIV--LALALVSRKKK 293