Pairwise Alignments

Query, 546 a.a., VRR-NUC domain. from Pseudomonas stutzeri RCH2

Subject, 549 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  510 bits (1314), Expect = e-149
 Identities = 269/543 (49%), Positives = 346/543 (63%), Gaps = 1/543 (0%)

Query: 4   SLAPELYYLSNFRTALAWVAERYADLLADEERAFLDTFNTLPWPSQALLVRMISRKGCHF 63
           S+    YYL NFR  + WV +RY DLL D+E AF+  F+ L  P+QAL+VRM+ RKG  F
Sbjct: 5   SVDDPFYYLHNFRQVVLWVEQRYQDLLDDQELAFIRAFSQLQAPAQALMVRMVMRKGELF 64

Query: 64  RLSKLVYPEIGDCLAAADPLLEQGWITEQALLTADEIAELLRKDEVLTHMPLTDRRAAQK 123
           R  +L Y EIGD   A  PLL  GW+ E   L  +++  LLRK+E+         R    
Sbjct: 65  RSDRLDYAEIGDTALALQPLLALGWVREPEQLDLEQLFALLRKEELARCFARQLNRPRAA 124

Query: 124 KAELLEQLRAMELPAQTFTDWCPMLDDQLLSLMVGELCDRLRLMFFGNLAQDWSEFVLTD 183
           K ELL QL+ + L A++  +W P  D ++L   +  LCDR+RL+FFGNL QDWS+FVL D
Sbjct: 125 KHELLAQLQPLALAARSLVEWFPDSDVRILQWCLQPLCDRIRLLFFGNLYQDWSDFVLAD 184

Query: 184 LGIYRYESVDIGPESRGFQCRQDLEDYLHLRQLRVSVEQGADLADIVPPLLAFSSSNPYL 243
           LG+ RYE V   P+SR  Q R D++  + L      +EQG D   I+  L    SSNP+L
Sbjct: 185 LGLLRYEQVPFSPDSRALQQRDDVDLAMALHHCAERLEQGGDPLPILATLQGLHSSNPWL 244

Query: 244 CSRQSCLLFQIAQQLERSGELEQALLLYQQSAHGEARWRQIRVLEQLGRDAEAYDQALAF 303
             R + L F + QQ ER GE + A  +Y Q  H +AR RQ+RVLE+  +  +A+ +AL  
Sbjct: 245 ARRHARLQFAVGQQCERLGEWDLATAVYAQCNHPQARIRQVRVLERSEQWHQAHARALQL 304

Query: 304 SQTPGSDEESQRLERALTRLQRKLGLQMVKKPKAASETRIDLVLPAPTHG-SVEIAVRDH 362
           +  P +  E Q L+R L RL RKLG    ++ +      I+L LP       VE AVR H
Sbjct: 305 AAAPANALEEQALQRMLPRLARKLGGPPQRRQRTTPLELIELELPRGDAALGVEEAVRQH 364

Query: 363 LQQDDAPVHYVENTLLCSLFGLLCWEAIFAPLPGSFFHPFHSGPVDLHSPDFYARRQHLF 422
           L Q+    HYVENTL  SLFGLLCWEAIFAP+PG+FF+PF + P DLH  DF  RR  LF
Sbjct: 365 LMQEGGQAHYVENTLFNSLFGLLCWEAIFAPVPGAFFNPFQAAPQDLHDSDFQQRRSALF 424

Query: 423 KRCLLQLEQPDYRQLIKARYQEKFGLQSPFVFWGMLDEARLELALQCIPAAHLHACFTRL 482
           +RCL +L++  +RQ I   Y  K GLQSPFV W ML E  LE AL C+PAA L  CF RL
Sbjct: 425 ERCLGRLDEGSHRQAILDCYVAKQGLQSPFVSWSMLSEELLEQALACLPAAALKQCFLRL 484

Query: 483 LRDLKANRAGMPDLIQFYPQEHRYRMIEVKGPGDRLQDNQKRWLSFAAEHGIAVVVCYVR 542
           L+D+++NRAGMPDLIQF+P++ RYRM+EVKGPGDRLQDNQ RWL+F  +HG+ V VC+VR
Sbjct: 485 LQDIRSNRAGMPDLIQFWPEQGRYRMVEVKGPGDRLQDNQLRWLAFCRQHGLPVAVCHVR 544

Query: 543 WAE 545
           W+E
Sbjct: 545 WSE 547