Pairwise Alignments

Query, 317 a.a., alpha-ketoglutarate TRAP transporter, solute receptor component (from data) from Pseudomonas stutzeri RCH2

Subject, 358 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  107 bits (268), Expect = 3e-28
 Identities = 76/267 (28%), Positives = 132/267 (49%), Gaps = 6/267 (2%)

Query: 54  IDGAKTSVQATKASVENLNLLQAGRGELAFSLGDSVEDAWNGVEDAGFKAPLKRLRAIAG 113
           + G     ++T  ++ N++ + A R + A    D    A++G      K  ++ LRAIA 
Sbjct: 91  VPGMVAVAKSTGGAIANIDAIAAKRLDAALVQSDIAYWAYHGTGIYKGKGAVQNLRAIAM 150

Query: 114 TYNNYIQIVASAESGIKTLDDLKGKRISVGAPKSGTELNARAIFKAAGLDYKDMGRVEFL 173
            Y   + +VA  ++ I ++ DLKGKR+S+G   SG  ++ R +  A G+    + +  FL
Sbjct: 151 LYPESLHLVARKDAKIHSVKDLKGKRVSLGDKDSGELVHGRLLLAAFGMTESQI-KQSFL 209

Query: 174 PYAESVELIKNRQLDATLQSSGLGMAAIRDLASTMPVTFVEIPAEVVEKIES--DAYLAG 231
               + + +   QLDA L   GL +  + +LA    +  + +    V+K+ +    + A 
Sbjct: 210 KPGPAADAVAAGQLDAMLVVDGLPVPIVSELAQRSDIVLIPLAGPEVDKMRATYPFFAAS 269

Query: 232 VIPAGTYDGQDADVPTVAITNILVTHEKVSDEVAYQMTKLMF--DNLAALGNAHSAAKDI 289
            IPA TY G DA+V T+ +  +LVT  +  +++ Y +T+ ++       L  +H   K +
Sbjct: 270 SIPADTYRGSDAEVKTLDVGVVLVTGAEQPNDLIYGVTRALWHPSTQKLLTESHPRGKLV 329

Query: 290 KLENA-TKNLPIPLHPGAERFYKEAGV 315
            L  A    L I LH GA  +Y +AGV
Sbjct: 330 SLSAAGLDKLGIQLHGGASAYYFDAGV 356