Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 850 a.a., TRAP transporter, 4TM/12TM fusion protein from Pseudomonas stutzeri RCH2

 Score =  339 bits (869), Expect = 4e-97
 Identities = 246/695 (35%), Positives = 355/695 (51%), Gaps = 90/695 (12%)

Query: 21  VALLFSIYQIVTAA-------FHPVSSQVLRAGHVGFLLLLVFLCYPA--RGNGKPFQPV 71
           +ALL+S++Q+  A+       F  ++    R+ H+ F LLL FL YPA  R        V
Sbjct: 32  LALLWSLFQLWIASPLPFVLGFGVLNDTETRSIHLAFALLLAFLAYPAFKRSPRDRVPLV 91

Query: 72  AWLLGLAGFATFFYQWYFEADLIQRSGDMTTADMVVGLTLIVLVFEAARRVMGIALPIIC 131
              LGL   A+  Y +   + L QR G++TT D+V     I L+ EA RR +G  L II 
Sbjct: 92  DIALGLVAAASAAYLFIAYSQLAQRPGNLTTMDLVTACIGIPLLLEATRRALGPPLAIIA 151

Query: 132 ALFLAYGLLGEYLPGDLAHRGYYLDQIVNQLSFGTEGLYGTPTYVSATYIFLFILFGSFL 191
            +FL Y + G ++PG LAHRG     + N     TEG++G    VS +++FLF+LFG+ L
Sbjct: 152 LVFLVYSVAGPWMPGLLAHRGVSFTALANHQWITTEGVFGIALGVSTSFVFLFVLFGALL 211

Query: 192 EQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTTGQFTIPLMKRF 251
           E+AG    F   A  + GH  GGPAK +VV+S + G I+GS +ANVVTTG FTIP+MKR 
Sbjct: 212 ERAGAGHYFIQLAFSMLGHFRGGPAKAAVVASGMTGLISGSSIANVVTTGTFTIPMMKRT 271

Query: 252 GYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPALLYFGSVFW 311
           G+    AG VE  SS+  QIMPPVMGA AF+M E + +P+VE+ K A +PAL+ + ++ +
Sbjct: 272 GFSAEKAGAVEVASSVNGQIMPPVMGAAAFLMVEYVGIPYVEVIKHAFLPALISYIALIY 331

Query: 312 MVHLEAKRAGLKGLPKDECPSAMAAVKERWYLLIPLVVLVWLLFSGRT-----------P 360
           +VHLE+ + GL+ LP+       A V + W   +   V    L SG +           P
Sbjct: 332 IVHLESMKLGLQALPR-------ANVAKPWMQRLIGFVFGAALISGLSLGVYYGLGWLKP 384

Query: 361 MFAGT----IGLALTAIVILGSAIILKVS-----------NFALRIAFWIALGLLCAGFF 405
           +   +    IG AL A+V LG   +LK++           N  L         LL    F
Sbjct: 385 LLGDSALWVIG-ALLAVVYLG---LLKIAASNPPLPHEDPNMPLEKLPETRPVLLSGLHF 440

Query: 406 QLGIGVIFGV-----IAALVAVCWFIKGGRDTLVICL---HALVEGARH-------AVPV 450
            L + V+        ++  ++  W    G   LVI L     L+   RH           
Sbjct: 441 LLPVVVLVWCLMIERLSPGLSAFW----GSVMLVIILLTQRPLLSWMRHDRSHPDGTFMD 496

Query: 451 GIACALVGVIIGVVSLTG--------------VASTFAGYILA-----VGENNLFLSLLL 491
           G+     G+I G  ++ G              V+ T  G +LA     +   NL L LLL
Sbjct: 497 GVIDLREGLIAGARNMIGIGIATAAAGIIVGAVSQTGVGLVLADLVELLSMGNLLLMLLL 556

Query: 492 TMLTCLVLGMGIPTIPNYIITSSIAAPALLDLG------VPLIVSHMFVFYFGIMADLTP 545
           T    L+LGMG+PT  NYI+ SS+ AP ++ LG      VPLI  H+FVFYFGIMAD+TP
Sbjct: 557 TAFLSLILGMGLPTTANYIVVSSLLAPVIVALGQQNGLIVPLIAVHLFVFYFGIMADVTP 616

Query: 546 PVALACFAAAPIAKERGLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDWGATLYMLFK 605
           PV LA FAAA ++K   ++  + A   ++    +PF+ ++N  L++ G D+   + +   
Sbjct: 617 PVGLASFAAAAVSKGDPIRTGVTAFYYSLRTAALPFLFIFNTDLLLIGVDFWHGVLIFIV 676

Query: 606 AAFAVGLWGAVFTGYLQRPMALWEKVLAFAAAASM 640
           A  A+ ++ A   GY       +E VL    A ++
Sbjct: 677 ATIAMLVFAAGTQGYFLVRSRWYESVLLLLVAFTL 711