Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 90/416 (21%), Positives = 162/416 (38%), Gaps = 57/416 (13%)

Query: 184 FILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTTGQF 243
           F+L G  +   G+ +   DFA+   GH  GG   V++ ++ +M  I+GS  A+       
Sbjct: 62  FMLAGELMNAGGISRRIVDFALAWIGHIRGGLGIVAIAAAVIMAAISGSAAADAAALTAM 121

Query: 244 TIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPAL 303
            IP+M++ GY  A +GG+ A  S+ + ++PP +  + F      NV   ++  AA++P L
Sbjct: 122 LIPMMRKAGYDVARSGGLIAAGSVIAPVLPPSIALIVF--GVIANVSIGKLFMAAIVPGL 179

Query: 304 LY-FGSVFWMVHLEAKRAGLKGLPKDECPSAM-AAVKERWYLLIPLVVLVWLLFSGRTPM 361
           L     V   + +  K  G +  P+   P  +    +  W L++P+ ++  +     TP 
Sbjct: 180 LMGVALVATWLWISRKEPG-RMQPRTPMPERLRITARATWALIMPIGIVGGMKLGVFTP- 237

Query: 362 FAGTIGLALTAIVILGSAIILKVSNFALRIAFWIALGLLCAGFFQLGIGVIFGVIAALVA 421
                    T   ++ +     V  F  R   W  L  L     +    V+F +  ALV+
Sbjct: 238 ---------TEAAVVAAVYAFIVGMFVYRELTWRMLYPLLLSSAKASAAVVFLIATALVS 288

Query: 422 VCWFIKGGRDTLVICLHALVEGARHAVPVGIACALVGVIIGVVSLTGVASTFAGYILAVG 481
             W I                     +P  ++  L  +I                     
Sbjct: 289 -AWLITVSE-----------------IPQQVSDMLQPLIA-------------------- 310

Query: 482 ENNLFLSLLLTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGV-PLIVSHMFVFYFGIM 540
             N  L +   M   +V+G  +   P  +I + I  P + + G+ P+    +FV    I 
Sbjct: 311 --NPTLLMFAMMALVIVVGTALDFSPTLLILTPILMPIVREAGIDPVYFGVLFVMNNAI- 367

Query: 541 ADLTPPVALACFAAAPIAKERGLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDW 596
             +TPPV +        A+ +  ++        IA   V F+ V  P++++    W
Sbjct: 368 GLITPPVGIVLNVVCSGARLQMGQLMKGLWPFLIAEVAVLFLLVIFPSIVLVPLRW 423