Pairwise Alignments

Query, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

Subject, 425 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 101/484 (20%), Positives = 196/484 (40%), Gaps = 67/484 (13%)

Query: 109 LTLIVLVFEAARRVMGIALPIICALFLAYGLLGEYLPGDLAHRGYYLDQIVNQLSFGTEG 168
           +TL V V  +    M I +P+  +L     +L  Y+       G +   I+ Q       
Sbjct: 1   MTLFVFV-GSLLGAMAIGVPVAFSLMFCGVVLMWYM-------GMFNTAIIAQ-----NM 47

Query: 169 LYGTPTYVSATYIFLFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGT 228
           + G  T+      F FIL G  +   G+ +   DFA+ L GH  GG   V++V++ +M +
Sbjct: 48  ISGADTFTLLAIPF-FILAGELMNSGGLSRRIIDFAIALVGHIRGGLGIVAIVAAIIMAS 106

Query: 229 ITGSGVANVVTTGQFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETIN 288
           I+GS  A+        IP+M + GY    +GG+ A   + + ++PP M  + F +A   N
Sbjct: 107 ISGSAAADTAALAAILIPMMAKAGYNIPRSGGLIAAGGIIAPVIPPSMAFIVFGVA--AN 164

Query: 289 VPFVEIAKAALIPALLYFGSVFWMVHLEAKRAGLKGLPKDECPSAM-AAVKERWYLLIPL 347
           V   ++  A ++P +L   S+     +  ++  +K LPK      + A V+  W L +P+
Sbjct: 165 VSITQLFLAGIVPGILMGISLIIAWLIVVRKDNIKPLPKTSGKERLVATVRAGWALGMPV 224

Query: 348 VVLVWLLFSGRTPMFAGTIGLALTAIVILGSAIILKVSNFALRIAFWIALGLLCAGFFQL 407
           ++L  +     TP  A  +                  + +AL +   I   L  A  F +
Sbjct: 225 IILGGIKAGIMTPTEAAVV-----------------AAGYALFVGMVIYRELKPADLFHV 267

Query: 408 GIGVIFGVIAALVAVCWFIKGGRDTLVICLHALVEGARHAVPVGIACALVGVIIGVVSLT 467
                             ++  + T +I                + CA + V   +++  
Sbjct: 268 -----------------LLRAAKSTSIIMF--------------LVCAAL-VSAWLITAA 295

Query: 468 GVASTFAGYILAVGENNLFLSLLLTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGVPL 527
            + +  AGYI  + +  + L ++  M+   ++G  +   P  +I + +  P +   G+  
Sbjct: 296 NIPNEVAGYIEPLIDRPMLL-MVAMMVLVFIVGTALDLTPTILILTPVLMPIVKQAGIDP 354

Query: 528 IVSHMFVFYFGIMADLTPPVALACFAAAPIAKERGLKISMWAIRIAIAGFIVPFMAVYNP 587
           +   +       +  +TPPV +     + + +    K+++      +A  IV  + V  P
Sbjct: 355 VYFGVLFIINNAIGLITPPVGVVLNVVSGVGRIPLGKVTIGVWPFLVAETIVLALLVIFP 414

Query: 588 ALMM 591
            ++M
Sbjct: 415 DIVM 418