Pairwise Alignments

Query, 393 a.a., heme d1 biosynthesis radical SAM protein NirJ from Pseudomonas stutzeri RCH2

Subject, 459 a.a., peptide-modifying radical SAM enzyme CbpB from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 53/227 (23%), Positives = 84/227 (37%), Gaps = 25/227 (11%)

Query: 28  RPPVVIWNLLRRCNLTCKHCYATSADSEFRDELDTDEALKVIDELHEAGVRV-------- 79
           +P  V +N   RCNL C +CY         + +  D  ++ +  L E   R         
Sbjct: 77  KPSAVYFNPTERCNLDCSYCYIPQTMRRSGEHMSRDRLMEAMARLDEYFSRTMPEGRKPQ 136

Query: 80  LILSGGEPLLRPDIFLLADYARDKGFFVALSTNGTLIDENNIGRIAAAQFDYVGISIDG- 138
           +I  G EPLL  D    A  +    F   + TN TL+D         ++   +G+S+D  
Sbjct: 137 IIFHGAEPLLNRDAMFEAIDSYSDRFRFGVQTNATLLDAVT-AEFLTSRGCGIGLSLDAP 195

Query: 139 LEAVHDEWRQLKGSFAASMHAIDLCRQRDIRVGLRTTLTQN--NYPQLPALLALMREHDV 196
              V D  R+           +D  R+     G     T N  N  QL  ++  +   +V
Sbjct: 196 TPEVADRSRKRWSGDGVFASTVDAIRRLKGYAGFNVICTMNRENLGQLTEMVEFLHAEEV 255

Query: 197 QKFYLSHLNYSGRGKRSSKA-------------DAHHQMTRDAMRQL 230
               L+ +  +  G + S A             D  HQ+ R+  R+L
Sbjct: 256 PACMLNVVRCTQPGGQDSWAEDQAVSKAYLAALDRSHQLYRETGRKL 302