Pairwise Alignments

Query, 371 a.a., prepilin-type N-terminal cleavage/methylation domain from Pseudomonas stutzeri RCH2

Subject, 242 a.a., prepilin-type N-terminal cleavage/methylation domain from Kangiella aquimarina DSM 16071

 Score = 49.7 bits (117), Expect = 8e-11
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 13 AEGFGLIELMVAMTIALILSAATLTLYLNMSRSNSELAKTSSQMEHGRLAIRLLRDDLMH 72
          + GF LIE MVA+TI LIL A   T +L M +S+      S   E+GR A+  L +++  
Sbjct: 7  SNGFTLIEYMVAITIGLILLAGVGTFFLGMQKSSQAQNGISELQENGRFALYFLTNEIQM 66

Query: 73 AGF------LNGFVPQFDDLT 87
          AG+      +    P + DLT
Sbjct: 67 AGWKEPDFIIGASTPNYIDLT 87



 Score = 33.1 bits (74), Expect = 8e-06
 Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 45/170 (26%)

Query: 195 DCTTQAETRRFLNNAYYIRDYAVTAGDGIPTLMQSTFDLDSGALDQQAAVPMVEGIEAMR 254
           DC   A       N +++ D  +  G G                   A+ P++ G+E   
Sbjct: 110 DCLGNAAAGGVATNRFFVEDGQLKCGAG------------------GASQPIINGVEVAH 151

Query: 255 FVFGVDDLGDTGLPVDYEQPVQWASELNRNSPTNRGDGAPDSTCTSATPCELEQLTNTVV 314
           F++GVD   D   P  Y      AS+L                  +A P E  Q+ +  V
Sbjct: 152 FLYGVDTDRD-NTPEKYVT----ASQL------------------AANPVEARQVASVKV 188

Query: 315 VQVHLLVRNIEPTPGYQSGKTYN-LGDQSFGPFTDAFQRHVYSTTVRLTN 363
           + +     N+  T    + +T+  LG+  F    D   R ++S+T+ L N
Sbjct: 189 ILLLASDTNVADT---NTARTFTILGEGEFTANNDRKLRRIFSSTIFLPN 235