Pairwise Alignments

Query, 1005 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

Subject, 1104 a.a., pilus assembly protein PilY from Rhodanobacter sp000427505 FW510-R12

 Score =  481 bits (1237), Expect = e-139
 Identities = 385/1155 (33%), Positives = 546/1155 (47%), Gaps = 229/1155 (19%)

Query: 9    LLALAVSLAQAASAEDIDLFVGVPSSSTGAPNVLIVLDNTANWNNAFSN----------- 57
            L+A A++L   AS EDIDL+ G P +  G PNVL+++DN +N N+A S            
Sbjct: 17   LIAAALTLPGMASGEDIDLYTGNPVNG-GQPNVLLIMDNASNGNSATSILPGSNCPTWIT 75

Query: 58   --------EMAALRSVISALP------EDKFRVGIMMFTETGGSNSGADGA---YVRAAL 100
                    E  AL ++I ++         + ++G+MMF         ADG    Y   + 
Sbjct: 76   SNPKSHDFEACALYNMIGSIGAPSSSLNGQVKMGLMMFNP-------ADGGLFFYPNPSP 128

Query: 101  RPMDAANKIAMANLVTSFDKLGDKSNGG-------------KVSLAMQEAYLYFAGATPY 147
             P      +  A   T    +     GG              +  +M+EA+ +F+G    
Sbjct: 129  TPPGPLPLLNTAGATTFQSAIAGTPGGGTGPGTAAVSTNSNNLDDSMEEAWAFFSGTKGL 188

Query: 148  AGNKKAKTDFAGNRGVSTAADAVYALPNNALASKDATSYLSPIVSGCGKNYVIYI----- 202
            +G                                  T+Y +PI   C KN++IY+     
Sbjct: 189  SG----------------------------------TTYTTPINDTCQKNFIIYLANVSG 214

Query: 203  SNGPAQDNSSDITQATTALA-GLGGSTTT-----IPITPSDSQDNVADEWARFMKKSS-- 254
            SN P   NS  + Q+T A A G+  ST       IP+ P+  Q N  DEWA+FM +S   
Sbjct: 215  SNAPKTSNSVTLPQSTLATAMGVPASTKPMSPPMIPLNPAGYQQNWGDEWAKFMYQSDLS 274

Query: 255  ----------EQITTYTIDINR---TTNRQGLGWTALLQSMARTSDGKYFDVTSTG-NQI 300
                      + I TYTI ++     T ++ +    L++SMA    GKYF V +   + +
Sbjct: 275  GIPASVAHNPQNIITYTIAVSDGCDATQQKCVDHINLVKSMAANGGGKYFYVRAGDVSAL 334

Query: 301  VDALNAIFSEVQATNSVFASVSLPVSVNAQGTYLNQVFIGMFRPDGDGFPRWYGNLKQYK 360
            V AL  I +EVQATNSVFASVSLPVSVNAQGT LNQV++GMFRPD    PRW GNLKQY+
Sbjct: 335  VKALITILTEVQATNSVFASVSLPVSVNAQGTSLNQVYVGMFRPDATAAPRWAGNLKQYQ 394

Query: 361  LGYIGSDLRLLDAD-GVSAI-NSNTGFITECARSFWTP-----TAADSYWGFSARG---- 409
            +GY  S+  +LD   G  AI N+ TGFI+  A S+WT      T  D  +  +A G    
Sbjct: 395  IGYDSSNNVVLDDSLGNPAISNAGTGFISPTALSYWTADHQTGTPGDGPFTVTASGYSSS 454

Query: 410  ------------NCLTGADSSGSNSPDGNIVEKGGQGYLLRA-----SSSRNMLTCGTAS 452
                        N  TG+     ++PDG +V+KGG   ++RA      S R + TC +  
Sbjct: 455  IVANWPASGFWVNRPTGS-GGAFDAPDGEVVDKGGVAEMIRADYLTDQSKRVIYTCTSVG 513

Query: 453  GCTS---LTSF-STTNNGITATALNAANETERTAMINWARGVD-------LKDENGNGNV 501
            GC S   L +F  TT  G +    ++      T +INW RG D        +   G G  
Sbjct: 514  GCPSSGTLPTFDDTTLAGSSLFGTSSTTTPTTTNLINWIRGTDNNTTTPGAESPAGPGTP 573

Query: 502  SEMRPSVHGDVVHSRPVAINYGTAGNPNVVAFYGGNDGALRAVVGNRTS--------ALG 553
              +RPS+HGDV+HSRP  +NYG  G+  +VAFYG NDG LRAV GN+ +        A G
Sbjct: 574  VTVRPSIHGDVLHSRPAVVNYG--GSIGIVAFYGSNDGLLRAVNGNKNATSPGVISMASG 631

Query: 554  THA-AGSELWSFMPPEFYGKIKRLYDNNVPISFPGYVGTSTPQPKDYGMDGPVVAYQD-- 610
                 G ELWSF+ P+F+ + +RLY+N+  ++    +G+++   K Y  DG    YQD  
Sbjct: 632  RLVRPGGELWSFIAPDFFNRFQRLYNNSPLLT----LGSTSGSGKPYFFDGTTTVYQDLR 687

Query: 611  ---ESSAWIYATMRRGGRAVYAFNVNTPASPSL-KWKRGCPNNFDANGAVVDTSCSDGFS 666
                   +IY T RRGGR +YAF+V+ P  P L  W +   N                  
Sbjct: 688  VAGSPKTYIYVTARRGGRLIYAFDVSDPTKPPLFLWSKTNAN----------------IP 731

Query: 667  GIGQTWAPPKLLKASGY---GNGTAPMLIMGGGYDACEDGDPHTCTDATKGNKVYVLDAD 723
             +GQTW+ PKL    G+        P+L+MGGGYD  ED DP    D T G  + VLDA 
Sbjct: 732  ELGQTWSQPKLALVKGHTDLSGNPIPVLVMGGGYDPAEDTDPVATAD-TMGRAIVVLDAF 790

Query: 724  SGELLRT----------FDTQRSVISDVTLV-RNSAGQALYGYLADLGGNVYRITMGASA 772
            +G  + T               ++ SD+TL+ RN  G A   Y  DLGGN++R+ +  S+
Sbjct: 791  NGSTVWTACASGCTASVSGMTYAIPSDITLLDRNGDGYADRLYTGDLGGNIWRVDVDDSS 850

Query: 773  PLQWTMTRIAALGCATAGT---CTRN----RKFMFAPDIVADGADYVLMLGSGDREKPLL 825
            P  W +T++A+LG    GT   C  N    RKF + PD+    +   ++  SGDRE PL 
Sbjct: 851  PANWKVTKLASLGTTGTGTGASCATNPTGARKFFYPPDVTPTTSFDAVVAASGDREHPLA 910

Query: 826  DYDDAAATTNYFFMLRDRPSDSTWLTSEASNCGGNLLCMNSLLGVTTQSAPTTTSLGQKK 885
              + ++   N F+ML+D  + ++  TS  +     L       G   ++ P  +S     
Sbjct: 911  S-NASSCVVNRFYMLKDTNTGTSVATSWTTITQSML---TDETGAAAETTPPYSSTSTTS 966

Query: 886  GWYLQL-DATEQVVTSAITVFGDVTFSTHQPRVP--TSGVC-SGLGETRVYTVNYLTGQG 941
            G+Y+ L  + E+ V + +TV G   F T+ P  P    G+C   LG  R Y +N+ TG+G
Sbjct: 967  GFYVTLTHSGEKAVNAPLTVAGYTYFGTNTPADPKLNPGMCYPNLGIARGYAINFRTGEG 1026

Query: 942  V----YHDVVGDGLPPSPVAGMVTLDDGV-TTVPFVIGADPSSPLQG---SPPINPASVM 993
                 Y    G GLPPSPV G+V ++ G     P +IG    +   G   S  +    V 
Sbjct: 1027 QNSNGYIVFDGGGLPPSPVFGLVEVNPGSGVYTPVLIGGGNQTGTGGGNNSSALGAQRVT 1086

Query: 994  QPTS----RVFWNIE 1004
             P +    R +W  E
Sbjct: 1087 PPNTGKRKRTYWFTE 1101