Pairwise Alignments

Query, 308 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score =  141 bits (355), Expect = 7e-38
 Identities = 78/213 (36%), Positives = 130/213 (61%), Gaps = 8/213 (3%)

Query: 3   AVEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLAPSEGQVKV 62
           A+E   ++ R+G  T ++ ++  +G GE+ G  G NG GKTT+MK++ GL+  SEG   +
Sbjct: 268 AIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSASL 327

Query: 63  LGRA--PNDPQVRRQLGYLPENVTFYPQLSGRETLRHFARL----KGAALTQVDELLEQV 116
           LGR    +D   R+++G++ ++ + Y +LS R+ L   ARL    K  +  ++DEL+E+ 
Sbjct: 328 LGRPVDASDLATRKRVGFMSQSFSLYGELSTRQNLALHARLFDLPKAESAQRIDELIERF 387

Query: 117 GLAHAADRRVKTYSKGMRQRLGLAQALLGEPKLLLLDEPTVGLDPIATQDLYQLIDRL-R 175
            LA  AD+       G+RQRL LA A+L  P++L+LDEPT G+DP A  D ++L+  L R
Sbjct: 388 DLAAIADQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLVELSR 447

Query: 176 QRGTSIILCSHVLPGVEAHINRAAILAKGRLQA 208
           ++G +I L +H +   +   +R +++  GR+ A
Sbjct: 448 EQGVTIFLSTHFMNEAQ-RCDRISLMHAGRVLA 479



 Score =  121 bits (303), Expect = 7e-32
 Identities = 78/226 (34%), Positives = 121/226 (53%), Gaps = 11/226 (4%)

Query: 3   AVEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLAPSEGQVKV 62
           A+  +G+S RYG +  LH L  +L  G    L G +GAGK+T + LI G+    +G+++V
Sbjct: 5   ALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQV 64

Query: 63  LGRAPNDPQVRRQL----GYLPENV--TFYPQLSGRETLRHFARLKGAALTQVDE----L 112
           LG +    + R  L     ++P+ +    YP+LS  E +R FA L G    + ++    L
Sbjct: 65  LGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQRMANL 124

Query: 113 LEQVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPKLLLLDEPTVGLDPIATQDLYQLID 172
           L+   L H A R     S GM+Q+LGL  AL+ EP LL+LDEPT G+DP++ +  ++L++
Sbjct: 125 LQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRFWELVE 184

Query: 173 RLR-QRGTSIILCSHVLPGVEAHINRAAILAKGRLQAVGSLSQLRA 217
           ++R QR    +L +              +L  GRL A G   +L A
Sbjct: 185 QVRAQRPQLTLLVATAYMEEAEQFEHCLMLDGGRLLAAGPSHELAA 230