Pairwise Alignments

Query, 265 a.a., Bacterial regulatory helix-turn-helix proteins, AraC family. from Pseudomonas stutzeri RCH2

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 53.1 bits (126), Expect = 6e-12
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 15/146 (10%)

Query: 133 QLAELSREAQQLLVEQE--------LMKRLQATQERRSPVQQLLSEITATEG-RARLAD- 182
           QL +LS  +   L +Q         L++R     E  +P  + L+   A E   ++LAD 
Sbjct: 130 QLHQLSEASASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADP 189

Query: 183 -----LLQTVPLGQRQLERLFRHHVGMTPKQFSRIQRVALVRNQLRAGQPLLDTALACGY 237
                L   V L      R+FR   G+ P  + + +R+A  R  L+ G      A   G+
Sbjct: 190 PSLEALAAAVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAASQVAFDLGF 249

Query: 238 SDQAHFIHDFKTVVGMTPGRYRASKV 263
           +DQ+H    FK   G+TPG YR + V
Sbjct: 250 ADQSHLSRQFKQAYGVTPGAYRQACV 275