Pairwise Alignments

Query, 236 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

Subject, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 5/143 (3%)

Query: 36  RLRMIESKRASILQAALELFSRFGLHGTSLDQVATQADVSKTNLLYYFGSKEELYTSVLR 95
           R +  +  R +IL+AA+++FS+ G  G  ++Q++T A  +   + YYFGSKE+L+ SVL 
Sbjct: 9   RAQQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLE 68

Query: 96  QLLEVWLQPLQAFSVE-QDPVEAIRDYLRVKLELSRDHPAESRLFCME-IMQGAPLLLGE 153
            +   + Q      ++  DP +A+R+ +    +    HP    +   E + QG   L   
Sbjct: 69  HIYASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQG---LHAR 125

Query: 154 LQQPLHDLVESKVAVIQAWIDAG 176
             Q L  L    V V++  I+AG
Sbjct: 126 KSQNLRALSGEAVGVLRPIIEAG 148