Pairwise Alignments

Query, 601 a.a., ABC-type multidrug transport system, ATPase and permease components from Pseudomonas stutzeri RCH2

Subject, 610 a.a., putative ABC transporter, ATP-binding protein/permease protein from Pseudomonas putida KT2440

 Score =  314 bits (804), Expect = 8e-90
 Identities = 217/604 (35%), Positives = 321/604 (53%), Gaps = 47/604 (7%)

Query: 18  PSRPVAFLWHYICARPWHFGGLLALIIGAASCAVAVQYGMKLLVDAMAQGT------ADR 71
           PS    F  +Y+      F  LL + + A+   VA+   +  ++D +AQGT      ++ 
Sbjct: 22  PSTVWPFYLYYLRQVWPSFVALLVVGLVASLIEVAMFSYLSRIID-LAQGTPNANFFSEH 80

Query: 72  GAANVWWPLGLFIGLIVTENVFWRLGGWLGCRTVVASVVD-IRVDLFKHLTGHPMRYFTE 130
               +W    + + +++   +F+ L   L  +T+   +   IR     ++    + +F  
Sbjct: 81  SGELIW----MLVVILLLRPLFFGLHDLLVHQTINPGMTSLIRWQNHTYVLKQSLNFFQS 136

Query: 131 HFAGSLGNRISAVG--------QAAGAIYGGLAWKIVPPIVDFLGAVVVLLTVDVRMAVA 182
            FAG +  RI   G        QA  A++  L + I         ++V+    D R+ + 
Sbjct: 137 DFAGRIAQRIMQTGNSLRDSAVQAVDALWHVLIYAIT--------SLVLFAEADWRLMLP 188

Query: 183 LILFVAIVAVLITGFGIRGRYKHQRFAAQSAR--VGGELVDAVSNVWTIKAFSARDREAE 240
           L+ +  IV+ +   F    R K +   +  AR  + G +VD  +N+ T+K F+  D E +
Sbjct: 189 LLAW--IVSYIAALFYFVPRVKERSVVSSDARSKLMGRIVDGYTNIATLKLFAHTDYEQQ 246

Query: 241 RLAHEIGFEARAQRRSWMYLEKARVMHDICLSVMAGGMLI----WAIQLWVGGEVTAGDV 296
                I    R Q        +     D+ ++ + G +++     A+ LW    +T G +
Sbjct: 247 YAREAI----REQTEKTQLASRVITSMDVVITTLNGLLVVATTGLALWLWSQSLITVGAI 302

Query: 297 VLVSALTFRILHGSRDLALALVDATQQIGAIDDTLRIIVQPHGLDDSDNQ--LMLAEGDI 354
            L + L  RI++ S  +   +    + IG + D L+ I QP  + D  N   L ++ G +
Sbjct: 303 ALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLQTIAQPVTVTDPPNAPALKVSRGAV 362

Query: 355 TFERIGFSYPDRGAVFEGLDLHIPAGQKVGVVGSSGAGKSTLINLIQRLDDVQDGRILID 414
            F  + F Y     V EGL+L I  G+K+G++G SGAGKSTL+NL+ RL DVQ GRILID
Sbjct: 363 RFVDVDFHYGKATNVIEGLNLDIRPGEKIGLIGPSGAGKSTLVNLLLRLYDVQGGRILID 422

Query: 415 GQDIRSVSQDSLREKIAVVPQETALFNRSIRENIRYGRPDASDEEVVAAARSAFCDGFIR 474
           GQDI  VSQ SLR +I ++ Q+T+L +RSIREN+ YGRP ASD E+  A R A  D FI 
Sbjct: 423 GQDIAKVSQASLRAQIGMITQDTSLLHRSIRENLLYGRPGASDAELHEAVRRARADEFIP 482

Query: 475 ELPQ-----GYDTLVGERGVMLSGGQRQRLGIARAFLKDAPILILDEATSALDTQSEGEI 529
           +L       G+D  VGERGV LSGGQRQR+ IAR  LK+APILI+DEATSALD++ E  I
Sbjct: 483 QLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVEAAI 542

Query: 530 QAALNNLVHNRTVVAVAHRLSTLASFDRIIVLRDGRIVEDGPPQELRRQGGEFDALWRMQ 589
           Q +L  L+  +TV+A+AHRLST+A  DR++VL  GRIVE G   EL  Q G +  LW  Q
Sbjct: 543 QESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGRIVESGSHSELLEQQGLYARLWHHQ 602

Query: 590 AEGF 593
             GF
Sbjct: 603 TGGF 606