Pairwise Alignments

Query, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 368 a.a., secretion protein HylD from Pseudomonas simiae WCS417

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 103/369 (27%), Positives = 156/369 (42%), Gaps = 42/369 (11%)

Query: 8   PVSKAWLTIIACALPLLGGCSSEAEPAPEPPRVALVEPLRPAESKAEALRFSGVVQSVTS 67
           P+    LT +A  + +L GC+S+A+ A E P    V   +   +  +   ++GVV + T 
Sbjct: 3   PLPLRLLTPLALLI-ILNGCNSKADTAAETPLPRPVLAAKVEAAGTQQSAYTGVVAARTE 61

Query: 68  TQLSFEVSGRIERILIDEGTRVRRGQTLAQLDRTDYRLQLRE-------AEARLRQLEAD 120
           + L F VSG++    +D G  V RG TL  LD  D+ L LR        A+A+LRQ   D
Sbjct: 62  SDLGFRVSGKVIERKVDPGQHVSRGDTLLVLDIGDFELALRSAKNRVHAAQAQLRQRRDD 121

Query: 121 LARKRTLLAEGIL-------APAAIEALQANTVAARVARDSAQRNIDHSTLTAPFDGVVA 173
             R + L + G +       +   +   +A   +A+      +    +S L A  DG++ 
Sbjct: 122 ENRYQRLASTGAVSRQIFDQSATLLRVAEAELASAQSDASQIENRRTYSVLKADGDGIIT 181

Query: 174 RRLAEPDMVVAVGTPVFEMQDNRHIEVSVDLPES-------AALSIPLGPELQAEAELVI 226
               +   VVA G  V  +  +   E  V+LPE+        AL+ P G   QA    V 
Sbjct: 182 DVRVDRGQVVAEGQIVARLAHDGAREAIVNLPENQRDQAAQKALAFPFGAPDQA----VT 237

Query: 227 ADLRLPLRYKEHSTQPREGARTY--RLVLQGEPPEDFNLLPGMAMRVRLERPAQPETDND 284
           A LR      E S       RTY  R VL G   + F L  G  + VRL+   Q +    
Sbjct: 238 ATLR------ELSASADPTTRTYRARYVLHG-AVDRFAL--GSTITVRLQGNGQAQQT-- 286

Query: 285 GFRLPLSALQTGSDGKHFIWQAADGRARRLAVELQQVEGDQALIRGDALQAQLPIIVAGG 344
             R+P+ AL     G       AD +     V++  +  + AL+       Q+ I+  G 
Sbjct: 287 --RVPIGALLDSGQGTGVWLIGADDKVSFAPVKVASLGQEDALLDSGVSPGQV-IVALGA 343

Query: 345 SKLHDDQPI 353
             LH   P+
Sbjct: 344 HLLHSGDPV 352