Pairwise Alignments

Query, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 356 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  102 bits (255), Expect = 1e-26
 Identities = 105/361 (29%), Positives = 157/361 (43%), Gaps = 29/361 (8%)

Query: 14  LTIIACALPLLGGCSSEAEPAPEPPRVALVEPLRPAESKAEALRFSGVVQSVTSTQLSFE 73
           LT I  A  LL  CS E  P PEP R  L   ++ AE +    RF+G +Q+   + L F 
Sbjct: 4   LTGILAASLLLVACSKEDAP-PEPVRPVLSMEVK-AEDQENLGRFAGTIQARYESNLGFR 61

Query: 74  VSGRIERILIDEGTRVRRGQTLAQLDRTDYRLQLREAEARLRQL-------EADLARKRT 126
           V GRI R ++D G  V +G  LA LD TD + QLR A+  L ++       +A+  R++ 
Sbjct: 62  VPGRIARRVVDVGAEVEKGALLAVLDPTDQQNQLRSAQGDLARVQAQYINAQANARRQQE 121

Query: 127 LLAEGILAPAAIEALQANTVAARVARDSAQRNID-------HSTLTAPFDGVVARRLAEP 179
           L   G+ A A ++  Q +    +   D A+ +++       ++ L     G+V    AE 
Sbjct: 122 LFNRGVGAQAQLDIAQTDLKTTQATLDQAKASVNQANDQLRYAELRTDHAGIVTAWNAEA 181

Query: 180 DMVVAVGTPVFEMQDNRHIEVSVDLPESAALSIPLGPELQAEAEL-VIADLRLPLRYKEH 238
             VV+ G  V  +      E  +DLP   A  +P         +L    +    +R  E 
Sbjct: 182 GQVVSAGQQVVTLARPDIKEAVIDLPAGLAERLPPDVVFLVAGQLDPSVNTTAIVREIEP 241

Query: 239 STQPREGARTYRLVLQGEPPEDFNLLPGMAMRVRLERPAQPETDNDGFRLPLSALQTGSD 298
             Q     R  RL L   PP  F L  G A+ V L     P  +     +PLSALQ   D
Sbjct: 242 QAQSATRTRRARLTLTETPPA-FRL--GTAISVTLSTAIAPRIE-----VPLSALQE-VD 292

Query: 299 GKHFIW--QAADGRARRLAVELQQVEGDQALIRGDALQAQLPIIVAGGSKLHDDQPIEAR 356
           GK  IW         +   + +   + D AL+  D ++    I++AG + L   Q ++  
Sbjct: 293 GKTRIWLLDTHSQTVQTRDISVISRDADSALL-NDGVKPGERIVIAGVNSLKPGQKVKID 351

Query: 357 E 357
           E
Sbjct: 352 E 352