Pairwise Alignments

Query, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 366 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  103 bits (257), Expect = 7e-27
 Identities = 105/370 (28%), Positives = 169/370 (45%), Gaps = 42/370 (11%)

Query: 15  TIIACALP-----LLGGCSSEAEPAPEPPRVALVEPLRPAESKAEALRFSGVVQSVTSTQ 69
           T +  ALP     LL GC  E E A    R A+V   +P+    ++  + G V++     
Sbjct: 4   TFLPFALPVSLVFLLAGCGHE-EAAQTTIRPAMVVQPQPSSQSMDS--YPGEVRARYEPD 60

Query: 70  LSFEVSGRIERILIDEGTRVRRGQTLAQLDRTDYRLQLRE-------AEARLRQLEADLA 122
           L+F + G++ + L++EG RV+  Q LA+LD  D RLQL         AEA L  + A+  
Sbjct: 61  LAFRIGGKVSKRLVEEGERVKANQALAELDPQDVRLQLEATRAQVAGAEANLSLVRAERD 120

Query: 123 RKRTLLAEGILAPAAIEALQANTVAARVAR--------DSAQRNIDHSTLTAPFDGVVAR 174
           R +TL+   +++ +  +  + N   A VAR        D A     ++ L AP DGVVA+
Sbjct: 121 RYKTLMDRQMVSRSQYDNSE-NLYRAGVARLKQIKAEFDVASNQAGYAVLRAPQDGVVAK 179

Query: 175 RLAEPDMVVAVGTPVFEMQDNRHIEVSVDLPESAALSIPLGPELQAEAELVIADLRLPLR 234
           R+ E   VV+ G  VF +  +   EV + LPE       +G  +  E      D R   R
Sbjct: 180 RVVEVGQVVSAGQTVFTLATDGEREVLISLPEQGFGRFKIGQPVSVEL-WSQPDQRFTGR 238

Query: 235 YKEHSTQPREGARTYRLVLQ---GEPPEDFNLLPGMAMRVRLERPAQPETDND-GFRLPL 290
            +E S      +RT+   +    G+ P +     G + RV +      + D D    +PL
Sbjct: 239 IRELSPAADPKSRTFAARVAFTGGKVPAEL----GQSARVFI------QVDGDIPLSVPL 288

Query: 291 SALQTGSDGKHFIWQA-ADGRARRLAVELQQVEGDQALIRGDALQAQLPIIVAGGSKLHD 349
           SAL +  +G  ++W+   D   +R  V +    G++ +   + L     +I AG   LH+
Sbjct: 289 SAL-SAENGASYVWRVQPDNTLKRTPVRIGAF-GEKTVPVLEGLSPTDWVIAAGVHVLHE 346

Query: 350 DQPIEARERN 359
            Q +   +R+
Sbjct: 347 GQQVRPVDRS 356