Pairwise Alignments

Query, 359 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 96/356 (26%), Positives = 158/356 (44%), Gaps = 53/356 (14%)

Query: 21  LPLLGGCSSEAEPAPEPPRVALVEPLRPAESKAEALRFSGVVQSVTSTQLSFEVSGRIER 80
           L +L GCS E  P   P RV  V+ ++P +  A  +  +G VQ+   T LSF V G+I  
Sbjct: 15  LYMLTGCSKEEVPETLP-RVG-VQQVQPTDFAAR-VTLTGDVQARVQTDLSFRVGGKIIS 71

Query: 81  ILIDEGTRVRRGQTLAQLDRTDY-------RLQLREAEARLRQLEADLARKRTLLAEGI- 132
             +D G  V+  Q LA+LD  D        + ++  A+AR+ Q  A   R++ LL +G  
Sbjct: 72  RSVDVGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQQKLLPKGYT 131

Query: 133 ------LAPAAIEALQANTVAARVARDSAQRNIDHSTLTAPFDGVVARRLAEPDMVVAVG 186
                  A AA+ + Q+   AA+    +A   + ++ L +   GV+  R AE   VV   
Sbjct: 132 SQSEYDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAGVITERQAEVGQVVQAT 191

Query: 187 TPVFEMQDNRHIEVSVDLPESAALSIPLGPELQAEAELVIADLRLP-------LRYKEHS 239
            P+F +  +   +   ++ ES  ++ P      ++A +V++ L  P       +R    +
Sbjct: 192 MPIFSLAVDGDRDAVFNVYESLLVAPP------SDAGVVVSLLDDPKVQAHGFVREITPT 245

Query: 240 TQPREGARTYRLVLQGEPPEDFNLLPGMAMRVRLERPAQPETDNDG---FRLPLSALQTG 296
              + G    ++ L+  P       PGM    +L  P    T+  G     LP SAL T 
Sbjct: 246 VSAQSGTVQVKVGLKDVP-------PGM----QLGAPVTATTNAQGRPSIELPWSAL-TK 293

Query: 297 SDGKHFIWQAADGRARRLAVELQQVEGDQAL----IRGDALQAQLPIIVAGGSKLH 348
           +  +  +W   +G      VEL++VE  + L    +    L+    ++V GG  LH
Sbjct: 294 ALHEPAVWVVGEGD----KVELRKVEIRRYLTGKIVVASGLKGGETVVVNGGQLLH 345