Pairwise Alignments

Query, 490 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score =  168 bits (425), Expect = 5e-46
 Identities = 139/487 (28%), Positives = 208/487 (42%), Gaps = 23/487 (4%)

Query: 3   AKALAAPLLLALALSACSSAPQHTDPQL---------PEGWFSAAGAHPADAETLAVWWR 53
           ++ L A L +AL LSAC+ +P +  P+L          EGW  A+   P+DA     WW 
Sbjct: 21  SRLLGAGLCVAL-LSACTLSPDYHRPELNSTAAQFKHAEGWTQAS---PSDAIARGAWWE 76

Query: 54  QFDDPQLSALVSRAMQQNHDVRLAMARVTAARAQLRQSRAGLLPSFDLPGSASRQWNEND 113
            + D  L+ALV    + N  V  + A+   A+A +R SRA L PS DL  S +R      
Sbjct: 77  IYGDAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRS----- 131

Query: 114 QEAEPDSPLADLIPDDDVISFDTWELALQATWELDLFGATRARRDSAARQLRSAEAQTVA 173
             A+     +  + ++     +T+   L  +WE+DL+G  R   ++      ++ A   +
Sbjct: 132 --AQGTGSSSSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLAS 189

Query: 174 ARLAVASNTAQGYLQLRALQGQRALLVEGIEVARELERIAGLLFHAGEVTRLDVEATSAE 233
            RL+  S   Q YLQLR +  Q+ LL   +       R+    + AG      V     +
Sbjct: 190 IRLSQQSELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQ 249

Query: 234 RASLEADLDELDIHLAEAQLALDTLLAEPPGSTAARLAASAPVPLAEQHIAPGQPIDLLR 293
             S +ADL +L    A+ + A+  LL + P   A  LA S  +P   Q I    P  LL 
Sbjct: 250 LKSTQADLIDLIWQRAQFENAIAVLLGKAPADFA--LADSKAIPALPQ-IPVSLPSQLLE 306

Query: 294 RRPDLIAEAARLDAAELQSLAARRDLFPKLAVQAAVGRSGFALGDAISSASNFARVGATF 353
           RRPD+ A    + AA      +R   FP L++  + G S  +  + I   + +  VG   
Sbjct: 307 RRPDIAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQL 366

Query: 354 GLPLLDYPRRGAAIDLADAEGETAYVAFEQALARALEEVERGLTRMAGQQRRHVSLSRTR 413
            L L D  +R A +D   A  +     + Q +     EVE  L ++       V      
Sbjct: 367 ALTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEAL 426

Query: 414 EHRERAHRLAQRSYELGEANLSEVLDAQRGALQARRQALEGRAALATAQVALYVALGGGW 473
           +    + RL +  Y  G     +V++ Q  AL   R  L        A V L  ALGGGW
Sbjct: 427 DAARESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGW 486

Query: 474 QPESADA 480
             E A A
Sbjct: 487 DAEQAFA 493