Pairwise Alignments

Query, 456 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 1e-28
 Identities = 66/156 (42%), Positives = 91/156 (58%), Gaps = 5/156 (3%)

Query: 296 DVLTRLLNRKFLPVVMAKEVLYARQSNNAFGVLAIDVDHFKRINDTYGHEAGDQVLQQVG 355
           D LT L NR+      + + +  R +     VL +DVDHFK+INDT+GH AGDQVLQ++G
Sbjct: 215 DELTGLNNRRAFFDNASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIG 274

Query: 356 ALLASNTRGGDYAFRLGGEEFLLVLVDIDASKALAAAEKLRERIAREHFRLSSGDVLQVT 415
           A ++++ R  D A RLGGEEF ++L +     A+  AE+LR  IA    +L   D   VT
Sbjct: 275 AAISASLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIA----KLRVNDEHPVT 330

Query: 416 VSVGMAVHDG-HPDYERLLQQADRALYQAKNGGRNR 450
            S+G+A       +   LL  AD A+Y +K  GRNR
Sbjct: 331 ASIGLAFAKAPATELGALLSSADSAMYLSKVSGRNR 366