Pairwise Alignments

Query, 456 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 544 a.a., GGDEF family protein from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 2e-29
 Identities = 80/212 (37%), Positives = 114/212 (53%), Gaps = 19/212 (8%)

Query: 250 ELKAIATLQETGERLAKLHHIR-------EQTRSIKFLLDSLFEQANDL--EAGRDVLTR 300
           +L A A   +       LH +R       E  R++ F L+ L E+   L  +A  D LT 
Sbjct: 337 KLAAGARTMDRAGTAEHLHQVRAWYFEAAELKRALLFSLNLLQERIGRLNRDAQTDPLTG 396

Query: 301 LLNRKFLPVVMAKEVLYARQSNNAFGVLAIDVDHFKRINDTYGHEAGDQVLQQVGALLAS 360
           L NR+ L + ++      R+    F  +A+D+DHFKRIND++GH+ GDQVL+Q+  L+  
Sbjct: 397 LGNRRSLEISLSLLEAEKRE----FAAIALDIDHFKRINDSHGHDVGDQVLRQLAELMRR 452

Query: 361 NTRGGDYAFRLGGEEFLLVLVDIDASKALAAAEKLRERIAREHFRLSSGDVLQVTVSVGM 420
             R GD   R GGEEFL++L     + A A AE+LR  +      +    V  VT+S+G+
Sbjct: 453 CCREGDLLCRTGGEEFLILLPGATLNVAAAVAERLRVTVQ----EMPVESVGAVTISLGV 508

Query: 421 AVHDG--HPDYERLLQQADRALYQAKNGGRNR 450
              DG  H +    L +ADRALY+AK  GRNR
Sbjct: 509 THWDGETHGEPMSALGEADRALYRAKQEGRNR 540