Pairwise Alignments

Query, 456 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 352 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  121 bits (303), Expect = 4e-32
 Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 9/218 (4%)

Query: 235 PESASILDYIERIDAELKAIATLQETGERLAKLHHIREQTRSIKFLLDSLFEQANDLEAG 294
           P +A + + I  I AE K +A L    E+  +L +   +   ++  LD L       EA 
Sbjct: 126 PSAAGLSELISGILAETKVMADLNRQLEQ--RLENSSNEVARLRNHLDDLKR-----EAS 178

Query: 295 RDVLTRLLNRKFLPVVMAKEVLYARQSNNAFGVLAIDVDHFKRINDTYGHEAGDQVLQQV 354
            D LT+L NRK     +   VL AR ++    +L ID+DHFK+ NDTYGH+ GDQVL+ V
Sbjct: 179 TDALTQLANRKLFDHSLNLAVLDARAADAPLSLLMIDIDHFKQFNDTYGHQLGDQVLKLV 238

Query: 355 GALLASNTRGGDYAFRLGGEEFLLVLVDIDASKALAAAEKLRERIAREHF-RLSSGDVL- 412
              L+   +  D A R GGEEF ++L      K++  AE +R +++ +      +G VL 
Sbjct: 239 ARSLSEVAQAKDTAARYGGEEFAVILPATPLEKSMEVAETIRNQVSTKRLTNRRTGQVLG 298

Query: 413 QVTVSVGMAVHDGHPDYERLLQQADRALYQAKNGGRNR 450
           QVT+S+G A+       + L+ +AD A+Y AK  GRNR
Sbjct: 299 QVTLSIGAALLREAEAPDSLVHRADEAMYLAKRDGRNR 336