Pairwise Alignments

Query, 456 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 302 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  114 bits (285), Expect = 4e-30
 Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 6/280 (2%)

Query: 175 SVSQNIGVEKERQRAALLDWENQLMFDLAIGNLSGALPQLAGSEFGLWFRHKASHAFQGS 234
           S ++ +G   +     +  W+  + +    G    + P    + F  W +  +       
Sbjct: 8   STTEALGAVLDEHLRWIGQWQRAVFYRDGRGGERSSAP----ASFQTWCQAASRDDLLQQ 63

Query: 235 PESASILDYIERIDAELKAIATLQETGERLAKLHHIREQTRSIKFLLD-SLFEQANDLEA 293
           P    + +  E++  + + I     +GE+  +  +     R  +F+L     E+A    A
Sbjct: 64  PAVQKLANLHEQMHRQARLILLKASSGEQPTESEYEGVIGRFEEFMLHLRRMERAFAAAA 123

Query: 294 -GRDVLTRLLNRKFLPVVMAKEVLYARQSNNAFGVLAIDVDHFKRINDTYGHEAGDQVLQ 352
            G D LT L  R+ +   + +E    R++   F V   D+D FK IND+YGH+ GD+VL 
Sbjct: 124 SGLDPLTGLRTRRGMGEALEREHNRYRRTGQPFCVALADIDKFKGINDSYGHDIGDRVLA 183

Query: 353 QVGALLASNTRGGDYAFRLGGEEFLLVLVDIDASKALAAAEKLRERIAREHFRLSSGDVL 412
              A+++   R  D AFR+GGEEFL+ L +    +  A  E+LR  + R    L  G V+
Sbjct: 184 ATAAVISRGVRSFDEAFRMGGEEFLVCLKETGLDEGYAVIERLRVDLMRSPVVLPDGRVI 243

Query: 413 QVTVSVGMAVHDGHPDYERLLQQADRALYQAKNGGRNRCV 452
            VT S G+         + L+  ADRALYQAKN GRNR +
Sbjct: 244 PVTASFGLVEAVADLTVDDLVVCADRALYQAKNSGRNRVI 283