Pairwise Alignments

Query, 329 a.a., outer membrane assembly lipoprotein YfiO from Pseudomonas stutzeri RCH2

Subject, 341 a.a., DNA transporter from Pseudomonas simiae WCS417

 Score =  497 bits (1279), Expect = e-145
 Identities = 255/341 (74%), Positives = 288/341 (84%), Gaps = 12/341 (3%)

Query: 1   MQVKHLLLIAILALTAACSSN-ETVDENLGEVELYQQAQADLDNKSYTSAISKLKALESR 59
           MQVKHLLLIAILA+TAACSS  E VDENL EVELYQ AQ DLDN S+TSA +KLKALESR
Sbjct: 1   MQVKHLLLIAILAMTAACSSTKEVVDENLSEVELYQLAQKDLDNNSFTSATAKLKALESR 60

Query: 60  YPFGRFAEQAQLELIYAYYRNVEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFDQDR 119
           YPFGR+A+QAQLELIYA Y+N EPEAA+SAAERFIRLHPQHPNVDYAYY+KGL SFDQD 
Sbjct: 61  YPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDV 120

Query: 120 GLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANEIHV 179
           GLLARFLPLDMTKRDPGAARDS+NEFAQLTSRYPNSRY+PDAK RMIYLRNLLA+ EIHV
Sbjct: 121 GLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHV 180

Query: 180 AHYYLKRQAYVAAANRGRYVVENFQSTPAVADGLAVMTEAYQRLGLDDLADTSLKTLQLN 239
           AHYYL RQAYVAAANRGRYVVENFQ TP+V DGLAVMTEAYQRL LD+LA TSL+TL+LN
Sbjct: 181 AHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKLN 240

Query: 240 YPDHATLEGGKFTPVETEDDNRSWLSKATLGLIEGETPRPDA-SRANRDVLRQYENASRD 298
           YPDH +L+ G+F P   E DNRSWLSK TLGLIE   P P   +RAN+DV++QY++A   
Sbjct: 241 YPDHPSLKDGQFVPQVAEADNRSWLSKYTLGLIESRPPLPPGETRANQDVIKQYQDAKDA 300

Query: 299 LPEELRP------VLKDVEQQ----EQKRSWWSRLTFGLFD 329
           +P +L+P      V+++ E Q     Q RSW+S +TFG+FD
Sbjct: 301 IPSDLKPHDENGDVIEEEEPQALGNNQDRSWFSYMTFGVFD 341