Pairwise Alignments

Query, 653 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  191 bits (484), Expect = 1e-52
 Identities = 124/399 (31%), Positives = 209/399 (52%), Gaps = 2/399 (0%)

Query: 247 IKRYPAELQRTRQLIRQRSELLQSSASKINAVQQALAELEPAVRGEHGRIQAEVRLLQGG 306
           + +Y   L + R+   +  +L  +     N ++    +L      +  R     R L   
Sbjct: 241 LSKYRTSLDQYRRAAVRVEQLQNNMEIMGNELRTVSLDLGKRKVEQRDREALAARSLLTS 300

Query: 307 IILLILLI-ALAIDRLQRQLTRTLGQLVPTLSAWAEGDFAGDARIESKIREIADIESSLN 365
           + LL +++ ALA   +  Q+T+ L Q +   +  A+GD +    ++ +  E+  +++S+ 
Sbjct: 301 VALLAMVVGALAAWLITLQITQPLRQTLAVAARIAKGDLSQVDTVQRR-DEMGQLQTSMR 359

Query: 366 RLRSYLLDLVGTLRQQATQVAASSRSLDEMSSDLHEGAQRQTGDTAQIRDSLGELEATIQ 425
            +   L DL+G + Q   Q++ ++  L   S D      +Q  +T Q+  ++ ++ AT+Q
Sbjct: 360 EMTLSLRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMNQMSATVQ 419

Query: 426 QVADGAGEAAEASRAAAHAVHQGQQVIGQSLTGLHGLVSEVQDNAAAIERLADETTTIGN 485
           +VA  A +A+ A+  A      G QV+ +++  +  L  ++    AA++ LA E+  IG+
Sbjct: 420 EVAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGS 479

Query: 486 VLTVIRSIAEQTNLLALNAAIEAARAGGHGRGFVVVADEVRSLAQRTSGATEEIQQLIGR 545
           +L VI+S++EQTNLLALNAAIEAARAG  GRGF VVADEVR LAQRTS ATEEI QLI  
Sbjct: 480 ILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQLIDS 539

Query: 546 LQQAARQSVEAMRSQVEHAQSTANLAQSADQALDEIVSTIATISRMAEQIAQATAQQGEA 605
           L     +    + S     + +  L++ A  AL +I  T+++I  M +QIA A+ +Q   
Sbjct: 540 LHNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEEQSVV 599

Query: 606 VGEIRGHSERIHQLGDANLSHISRGREQSAQMLQLGSEL 644
             +I      +  + D   +   +    S ++ QLG +L
Sbjct: 600 AEQINRSVINVRDVSDQTSAASEQTAASSGELEQLGQQL 638



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 10/137 (7%)

Query: 126 AEREISAALAQLDDYRAQSDHPAAQHYQQPLFTTGQQLLRLSHARGKLVVSGRYELAGEV 185
           A  ++SA + ++     Q+   A    QQ     G Q++  S A G++      +LAG++
Sbjct: 410 AMNQMSATVQEVAQNAEQASLAATNADQQA--QVGDQVV--SEAIGRIE-----QLAGQM 460

Query: 186 EQTLRQLEHSAAKIDALPLLGVLTADPSAANSFAALLDLNDRAEQTREDRGIA-LKRELA 244
           +  L  ++H A +   +  +  +    S   +  AL    + A      RG A +  E+ 
Sbjct: 461 DHCLAAMQHLAGESQRIGSILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 520

Query: 245 GLIKRYPAELQRTRQLI 261
           GL +R     +   QLI
Sbjct: 521 GLAQRTSTATEEIGQLI 537