Pairwise Alignments
Query, 653 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2
Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440
Score = 212 bits (539), Expect = 5e-59
Identities = 153/486 (31%), Positives = 248/486 (51%), Gaps = 26/486 (5%)
Query: 178 RYELAGEVEQTLRQLEHSAAKIDALPLLGVLTADPSAANSFAALLDLNDRAEQTREDRGI 237
+Y+L + Q L Q+ +ID + A+ S+AN AAL L+ T
Sbjct: 168 QYQLISKARQQLLQV-----RIDVRGYI----AENSSANEQAALRQLDAALADTDN---- 214
Query: 238 ALKRELAG---LIKRYPAELQRTRQLIRQ-RSELLQSSASKINAVQQALAELEPA----- 288
LKR+L ++++ + R +RQ R + + S+ Q ++ +
Sbjct: 215 -LKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQ 273
Query: 289 VRGEHGRIQA-EVRLLQGGIILLILLIA-LAIDRLQRQLTRTLGQLVPTLSAWAEGDFAG 346
++ E I++ + R LQ LL LL+ LA + RQ+TR L + + A GD
Sbjct: 274 IQLERRDIESTQARSLQAIATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQ 333
Query: 347 DARIESKIREIADIESSLNRLRSYLLDLVGTLRQQATQVAASSRSLDEMSSDLHEGAQRQ 406
R+ + E+ ++ + R+ + L +L+ +R TQ+A+++ L ++ GA Q
Sbjct: 334 HMRVTRR-DELGVLQQGIARMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQ 392
Query: 407 TGDTAQIRDSLGELEATIQQVADGAGEAAEASRAAAHAVHQGQQVIGQSLTGLHGLVSEV 466
+T Q+ ++ E+ AT+Q+VA A +A+ A+ A G +V+G+++ + L ++
Sbjct: 393 KVETDQVATAMHEMAATVQEVARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDM 452
Query: 467 QDNAAAIERLADETTTIGNVLTVIRSIAEQTNLLALNAAIEAARAGGHGRGFVVVADEVR 526
+ A+ L E+ IG+V+ VI+S+AEQTNLLALNAAIEAARAG GRGF VVADEVR
Sbjct: 453 HRSTEAMNLLQQESQKIGSVMDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 512
Query: 527 SLAQRTSGATEEIQQLIGRLQQAARQSVEAMRSQVEHAQSTANLAQSADQALDEIVSTIA 586
LAQRT +TEEI++LI LQ +Q AM+ S+ LA+ A +L+ I ST++
Sbjct: 513 GLAQRTQKSTEEIEELIASLQHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVS 572
Query: 587 TISRMAEQIAQATAQQGEAVGEIRGHSERIHQLGDANLSHISRGREQSAQMLQLGSELDR 646
+I M +QIA A QQ EI + + + + S ++ +LG +L
Sbjct: 573 SIQSMNQQIAAAAEQQSAVAEEISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQT 632
Query: 647 ATQAFR 652
FR
Sbjct: 633 LVSQFR 638
Score = 57.4 bits (137), Expect = 2e-12
Identities = 113/526 (21%), Positives = 202/526 (38%), Gaps = 60/526 (11%)
Query: 38 LMARYLSLSQQFQHHAAENIQSYLASGDALRYSQAQQALAELQEGSAELPSVLAENLRPS 97
+ A LSL++ Q + A A+R QA AL++ E SV +
Sbjct: 113 ISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLI 172
Query: 98 LEELIRFTAVDLLAAGKLAGDPQGLLLQAEREISAALAQLD---------DYRAQSDHPA 148
+ + V + G +A + A R++ AALA D D R Q A
Sbjct: 173 SKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENA 232
Query: 149 AQHYQQPLFTTGQQLLRLSHARGKLVVSG-----RYELAGEVEQTLRQLEHSAAK-IDAL 202
Y+ + + ++ +R ++ V G R + +++ R +E + A+ + A+
Sbjct: 233 VLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLERRDIESTQARSLQAI 292
Query: 203 P-----LLGVLTA------------DPSAANSFAALLDLNDRAEQTREDRGIALKRELAG 245
L+GVL A D A A DL TR D L++ +A
Sbjct: 293 ATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQQGIA- 351
Query: 246 LIKRYPAELQRTRQLIRQRSELLQSSASKINAVQQALAELEPAVRGEHGRIQAEVRLLQG 305
R L+ IR + S+A +++AV + + + + E ++ + +
Sbjct: 352 ---RMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAA 408
Query: 306 GIILL------ILLIALAIDRLQRQLTRTLGQLVPTLSAWAEGDFAGDARIESKIREIAD 359
+ + A D R R +G+ + + AE + +E
Sbjct: 409 TVQEVARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQK 468
Query: 360 IESSLNRLRSY-----LLDLVGTLRQQATQVAASSRSLDEMSSDLHEGAQRQTGDTAQIR 414
I S ++ ++S LL L + +A + + R ++ ++ AQR T +I
Sbjct: 469 IGSVMDVIKSVAEQTNLLALNAAI--EAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIE 526
Query: 415 DSLGELEATIQQVADGAGEAAEASRAAAHAVHQGQQVIGQSLTGLHGLVSEVQDN----A 470
+ + L+ QQVA+ A + SRA + + + G SL + VS +Q A
Sbjct: 527 ELIASLQHGTQQVAN----AMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIA 582
Query: 471 AAIERLADETTTIGNVLTVIRSIAEQTNLLALNAA---IEAARAGG 513
AA E+ + I + +R ++EQT + A +E AR GG
Sbjct: 583 AAAEQQSAVAEEISRSILNVRDVSEQTAAASDETAASSVELARLGG 628