Pairwise Alignments

Query, 653 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  166 bits (420), Expect = 2e-45
 Identities = 97/244 (39%), Positives = 142/244 (58%)

Query: 378 LRQQATQVAASSRSLDEMSSDLHEGAQRQTGDTAQIRDSLGELEATIQQVADGAGEAAEA 437
           L+  A  ++  +R  D ++     G +RQ  +T Q+  ++ ++ AT Q+VA+     A+A
Sbjct: 246 LQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAVNQMAATTQEVANHVQRTADA 305

Query: 438 SRAAAHAVHQGQQVIGQSLTGLHGLVSEVQDNAAAIERLADETTTIGNVLTVIRSIAEQT 497
           ++ A     QG+Q+ G++   +  L + V +    + +LA ++  IG V+ VI+ IA+QT
Sbjct: 306 TQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIADQT 365

Query: 498 NLLALNAAIEAARAGGHGRGFVVVADEVRSLAQRTSGATEEIQQLIGRLQQAARQSVEAM 557
           NLLALNAAIEAARAG  GRGF VVADEVR LAQRT+ +T +I  LI +LQQ A  +V  M
Sbjct: 366 NLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQTASNAVLTM 425

Query: 558 RSQVEHAQSTANLAQSADQALDEIVSTIATISRMAEQIAQATAQQGEAVGEIRGHSERIH 617
            +    AQ   +    AD+AL  I   +A I+ MA QIA AT +Q     EI  +   I 
Sbjct: 426 ETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADEISRNISTIA 485

Query: 618 QLGD 621
           +L D
Sbjct: 486 ELAD 489



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 37/203 (18%), Positives = 82/203 (40%), Gaps = 28/203 (13%)

Query: 473 IERLADETTTIGNVLTVIRSIAEQTNLLALNAAIEAARAGGHGRGFVVVADEVRSLAQRT 532
           + RL D    + +      ++A +++       +E  +             EV +  QRT
Sbjct: 243 LTRLQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAVNQMAATTQEVANHVQRT 302

Query: 533 SGATEEIQQLIGRLQQAA---RQSVEAMRSQV-EHAQSTANLAQSADQ--ALDEIVSTIA 586
           + AT+E  +L  + +Q A   R+++E + + V E  Q+   LA+ +D+   + +++  IA
Sbjct: 303 ADATQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIA 362

Query: 587 TISRM----------------------AEQIAQATAQQGEAVGEIRGHSERIHQLGDANL 624
             + +                      A+++ Q   +  E+ G+I G   ++ Q     +
Sbjct: 363 DQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQTASNAV 422

Query: 625 SHISRGREQSAQMLQLGSELDRA 647
             +  G  Q+ + +    + D A
Sbjct: 423 LTMETGHRQAQEGVDRVMQADEA 445



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 41/213 (19%), Positives = 80/213 (37%), Gaps = 22/213 (10%)

Query: 458 GLHGLVSEVQDNAAAIERLADETTT---IGNVLTVIRSIAEQTNLLALNAAIEA----AR 510
           GL GL S  Q     + RLA++TT+   I  + T  R +  +  +  L+          R
Sbjct: 187 GLLGL-SWQQRGLKRLLRLAEQTTSDPLIAQMFTDSRGVQARLEMAMLSQDARMKTCLTR 245

Query: 511 AGGHGRGFVVVADEVRSLAQRTSGATEEIQQLIGRLQQAARQSVEAMRSQVEHAQSTANL 570
                      A +  +LA ++S   E  +    ++  A  Q     +    H Q TA+ 
Sbjct: 246 LQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAVNQMAATTQEVANHVQRTADA 305

Query: 571 AQSAD--------------QALDEIVSTIATISRMAEQIAQATAQQGEAVGEIRGHSERI 616
            Q A+              +A++ + + +    +   Q+A+ + + G  V  I+G +++ 
Sbjct: 306 TQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIADQT 365

Query: 617 HQLGDANLSHISRGREQSAQMLQLGSELDRATQ 649
           + L        +R  E       +  E+ +  Q
Sbjct: 366 NLLALNAAIEAARAGEMGRGFAVVADEVRQLAQ 398