Pairwise Alignments

Query, 620 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 758 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Sphingobium sp. HT1-2

 Score =  130 bits (326), Expect = 3e-34
 Identities = 70/168 (41%), Positives = 94/168 (55%)

Query: 437 DLSEREIELKQAAFHDPLTELPNRRYLIERIEAAMAEAARRDESIALLLIDLDHFKPIND 496
           D  + E  L   A  D LT L NR + +  +  A     R    +A++LID+D FK IND
Sbjct: 314 DRKQAERHLAHLAMTDALTGLANRSHFMASLMQAAQSTERSGGQMAVVLIDVDEFKRIND 373

Query: 497 DHGHDAGDLLLRTLGQRLRGLVRSSDMAARLGGDEFAILLTGANVEQDASQVAERLLYEL 556
             GHDAGD LL  + +RLR  VR +DM AR+GGDEFA++LT      D   +  R++  L
Sbjct: 374 SAGHDAGDALLCAVAERLRDSVRPADMIARMGGDEFAVILTRLRGLADLDTILSRMIARL 433

Query: 557 SLPVPYRGNSLAVTVSVGAAFFPHHADEFTQLYKAADEALYRAKQQGR 604
            +P+ + G  +   VS+G A +P HA +   L K AD ALY AK  GR
Sbjct: 434 HMPLRHGGRDIDCRVSMGVALYPDHAGDMIDLMKHADIALYEAKNSGR 481



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 11/71 (15%)

Query: 16  LPAHADTALIGAHDSGRNLNAYVELLMDPGAELEVEDLQRPEVQARFQPAQGKASVGQSP 75
           L  HAD AL  A +SGR        L +PG       L+  + +AR       A     P
Sbjct: 465 LMKHADIALYEAKNSGRGR----ACLFEPGL------LESWQTEARMLERARDALAHAQP 514

Query: 76  HPWW-VKVTLQ 85
            PW+  KV LQ
Sbjct: 515 VPWYQPKVDLQ 525