Pairwise Alignments

Query, 620 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  139 bits (350), Expect = 7e-37
 Identities = 93/262 (35%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 348 VNLLLLRATGVIQPAAWSGYVFPLAVAAESILFSFALASRIQILKQERAAALEHADREKT 407
           VN    R TG          V+ + + A+    S  LA   ++ ++ R    E   R K 
Sbjct: 563 VNDGFCRLTGYSTDEVIGHTVYEIGIWADDKQRSALLA---ELRERGRVHHREMLGRNKR 619

Query: 408 ERLKHMQASAEHLSLAVEARTAELAQANRDLSEREIELKQAAFHDPLTELPNRRYLIERI 467
             +  ++ S E ++L         A+    L   + +++  A+HDPLT LPNR  L++R+
Sbjct: 620 GDILTVEVSVEPITLNEVDCLLLTARDVSQLKNAQAQIRHLAYHDPLTNLPNRALLMDRL 679

Query: 468 EAAMAEAARRDESIALLLIDLDHFKPINDDHGHDAGDLLLRTLGQRLRGLVRSSDMAARL 527
              +A   R +   ALL +DLDHFK IND  GH  GD +L+ +  RL   VR  D  ARL
Sbjct: 680 SQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRLEDTVARL 739

Query: 528 GGDEFAILLTG-----ANVEQDASQVAERLLYELSLPVPYRGNSLAVTVSVGAAFFPHHA 582
           GGDEF +LL+G      +VE+   ++A+ L   L+ P+   G  L VT S+G A  P H 
Sbjct: 740 GGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHG 799

Query: 583 DEFTQLYKAADEALYRAKQQGR 604
                L K AD ALYRAK  GR
Sbjct: 800 TTPADLLKRADIALYRAKDSGR 821