Pairwise Alignments

Query, 297 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

Subject, 287 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  271 bits (694), Expect = 1e-77
 Identities = 154/298 (51%), Positives = 186/298 (62%), Gaps = 12/298 (4%)

Query: 1   MRALAEFIMRGRMQAIFVVAGAAALPMLFWLSAAAGCLVLLRRGLNDALGVLVWAVLPAL 60
           MRALA FIMRGR+QA  VV  +A LP+LFWLSAAAG LVLLRRG  DA  V+   +L  L
Sbjct: 1   MRALASFIMRGRVQATLVVVISAVLPLLFWLSAAAGSLVLLRRGFKDATSVIAGGLLAGL 60

Query: 61  AWWYFGDPRTLLVLLGSLGLALLLRSHASWVRVMLCSVGLGLLYVWALGAVFGEPIAALA 120
           A W  GDP T LV+ G+L LA +LR+   W RV+L S    + +   L     +    LA
Sbjct: 61  AVWVMGDPITFLVIAGALALAAMLRAEHPWSRVLLASAVFAVAFSLVLDLALAQTFDVLA 120

Query: 121 SELQKVLPDALSGAYQQLSVEERGRLES-LLAPVLTGLLAALLQIVTLLSLMLGRYWQAA 179
               + +P           +E +  L   L+ PVL    A  +Q+ ++L+LML RYWQAA
Sbjct: 121 KAFAEAMP----------KIEGQPVLSGELIRPVLVASTAVTVQLFSVLALMLARYWQAA 170

Query: 180 LYNPGGFGSEFRALRFPPLLAMSLLVGMLLGPNLGVQLAVLTPLCSVPLVFAGIALMHGL 239
           LYNPGGFG EFR L+ P      L+  M++ P +G Q  +L    S+ LV AGIALMHGL
Sbjct: 171 LYNPGGFGREFRELKLPKQTMAVLVAVMVVAPFIGPQFIILASASSLVLVLAGIALMHGL 230

Query: 240 VAQGRLPRFWLVGLYVTLVLFMQLIYPLLAVLAIVDSLFDFRGRAAGKNGAGPANGEG 297
           VAQGRL  FWLVG+YVTL L MQLIYPLL VLAIVDSL DFRGR +   G   ANGEG
Sbjct: 231 VAQGRLAGFWLVGMYVTLPLIMQLIYPLLMVLAIVDSLIDFRGRKS-PPGKDSANGEG 287