Pairwise Alignments

Query, 720 a.a., His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. from Pseudomonas stutzeri RCH2

Subject, 831 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  274 bits (700), Expect = 1e-77
 Identities = 200/531 (37%), Positives = 288/531 (54%), Gaps = 48/531 (9%)

Query: 193 YELVNDAYRQVIGH--RQLLGKTIRDGLPEIEGQVLIGLLDDVYRTGQPYIGKRVSLFLK 250
           + L N AY +  G   ++L GKTIR+ L +   +V  G  D +    +   GK  S F+ 
Sbjct: 312 FRLNNSAYLEWYGMTPQELYGKTIREVLGD---EVYAGREDKIAAALK---GKACS-FMT 364

Query: 251 RQPERE--PEEVILDFVLQPIVENDGKVIGIFVQGQDVTEQQRNEMELRRYRDHLEELVR 308
             P R+  P   ++ ++  P   NDG V G ++   D TE++  E  LR   ++LEE V 
Sbjct: 365 ITPHRDGRPRHALMKYL--PRFSNDGSVNGFYIFVIDETERKLTEEALRHLNENLEERVA 422

Query: 309 ERTLALQQSEA-------ERQMTEQALLQAQRLEAVGKLTGGIAHDFNNMLQIIGGNLQL 361
           +RT AL ++         ER+  E AL  AQ++EAVG+LTGGIAHDFNNML  I G+L L
Sbjct: 423 QRTQALAEANQRLQNEMFERERAEDALRHAQKMEAVGQLTGGIAHDFNNMLTGIIGSLDL 482

Query: 362 LRRSL--GSDETAARRLDSAVSGVEKGARLASQLLAFASRQPLLPQQVHLPDLLEQMHEL 419
           ++R +  G  +   R  D+AVS   + A L  +LLAF+ RQ L  + +    L+  + +L
Sbjct: 483 MQRYIAAGRSDEIGRFTDAAVSSAHRAAALTHRLLAFSRRQSLDRRPLDPNQLVASLEDL 542

Query: 420 LNGALGSAVQLELQVLGRPWPVFVDVGNLQSVVLNLAANARDAMSGGGRVVLRLENRLL- 478
                G+ + L++++    WPV  D   L++ +LNL  NARDAM  GG +++   N  L 
Sbjct: 543 FRRTKGAHITLKVKLGHDIWPVNTDASQLENALLNLVINARDAMPDGGELLIETANSYLD 602

Query: 479 GADV----PVGQGGGYVLLSVIDEGSGMTEDVRARAFEPFFTTKQNSNASGLGLSMVYGF 534
           G D+    PV + G YV+L V D G+GM   + A+AF+PFFTTK     +GLGLSM+YGF
Sbjct: 603 GTDITTLEPV-KAGDYVMLGVCDNGTGMAPKILAKAFDPFFTTKPIGQGTGLGLSMIYGF 661

Query: 535 VKQSGGFVTLESGEQGGTAVHVHLPRHVENEPQLPGQGGDGAVESIQDDASRSAPESGAD 594
            +QSGG VT++S    GT V ++LPR       L G     A+ES        AP + A 
Sbjct: 662 AQQSGGHVTIQSEPGQGTCVRLYLPR-------LYGT----ALESSLPPHLSEAPVALAG 710

Query: 595 SVDGSLRILFVEDDPTLRMLTGEVMMELGHEVVASETAEEALEILERQ-PFDVLLTDVGL 653
                  ++ VEDDP +RML   V+ ELG+    +  A  AL +LE     D+L+TDVGL
Sbjct: 711 EA-----VVVVEDDPAVRMLVVNVLDELGYTAHQAADARTALPLLESDLRVDLLVTDVGL 765

Query: 654 AGMSGIDLAREAGTRLPRLSLVIASGYPVNASD-VGL--DRLRTMLKPYDI 701
            GM+G  LA  A    P L ++  +GY   A++  G   D +  + KP+ I
Sbjct: 766 PGMNGRQLAEIARQYRPGLRVLFMTGYAEKAAERQGFLEDGMDMVAKPFSI 816



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 20/80 (25%)

Query: 273 DGKVIGIFVQGQDVTEQQRNEMELRRYRDHLEELVRERTLALQQSEAERQMTEQALLQAQ 332
           DG+V  +F +G             R Y+DH     R    AL  +E  R+ TEQAL Q+Q
Sbjct: 245 DGQVRWVFARG-------------RCYKDHQGRPARFLGAALDLTE--RKHTEQALRQSQ 289

Query: 333 R-----LEAVGKLTGGIAHD 347
                 + A+  L G + H+
Sbjct: 290 TELQLIINAMPVLIGYVDHE 309