Pairwise Alignments

Query, 720 a.a., His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. from Pseudomonas stutzeri RCH2

Subject, 688 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  228 bits (581), Expect = 8e-64
 Identities = 153/408 (37%), Positives = 222/408 (54%), Gaps = 29/408 (7%)

Query: 316 QSEAERQMTEQALLQAQRLEAVGKLTGGIAHDFNNMLQIIGGNLQLLRRSLGSD--ETAA 373
           Q +      E AL QAQ++EAVG+L+GGIAHDFNN+L  I G  +L+R+ L     +  A
Sbjct: 295 QEQERLAKAEAALRQAQKMEAVGQLSGGIAHDFNNLLGGILGAQELMRQRLDQSRFDALA 354

Query: 374 RRLDSAVSGVEKGARLASQLLAFASRQPLLPQQVHLPDLLEQMHELLNGALGSAVQLELQ 433
             L+ + S  ++ + L  +LLAF+ +Q L P    +  L+  M +LL   +G A+ L  +
Sbjct: 355 PLLELSSSAAQRASSLVHRLLAFSRQQTLQPCSTQVATLVAGMEDLLRRTIGPAITLSSR 414

Query: 434 VLGRPWPVFVDVGNLQSVVLNLAANARDAMSGGGRVVLRLENRLLGADVPVG---QGGGY 490
              + WP F+D   L+S +LNL  NARDAM  GG + +  +N LL  +  V        +
Sbjct: 415 FASQLWPTFIDPPQLESALLNLCINARDAMPAGGVIEIIGDNLLLDDEQAVALELPASEF 474

Query: 491 VLLSVIDEGSGMTEDVRARAFEPFFTTKQNSNASGLGLSMVYGFVKQSGGFVTLESGEQG 550
           V LS++D GSGM+ +V  RA EPFFTTK     +GLGLSM YGFV+QSGG + + S    
Sbjct: 475 VRLSIVDNGSGMSAEVVERAVEPFFTTKPMGQGTGLGLSMTYGFVRQSGGQLRVLSVPGE 534

Query: 551 GTAVHVHLPRHVENEPQLPGQGGDGAVESIQDDASRSAPESGADSVDGSLRILFVEDDPT 610
           GT + + LPRH                E  Q   S+        S + + RIL VED   
Sbjct: 535 GTRIELLLPRH---------------HEQAQAPISKPPRTLLQRSSEAAKRILLVEDQTA 579

Query: 611 LRMLTGEVMMELGHEVVASETAEEALEILER-QPFDVLLTDVGL-AGMSGIDLAREAGTR 668
           LR++ GEV+ ELG+ V A E    AL  L+  +  D+LL+DVGL  G++G  +A     R
Sbjct: 580 LRLVIGEVLEELGYRVDAFENGPSALTHLQSGERPDLLLSDVGLPGGLNGRQVAERFRER 639

Query: 669 LPRLSLVIASGYPVNAS---DVGLDRLRTMLKPYDI----HQVRELLD 709
            P L +++ +GY  +A+      L     + KP+++     +VRELL+
Sbjct: 640 YPDLKVLLITGYDESAAFSDGQPLQGTLVLTKPFELEALAERVRELLE 687



 Score = 37.0 bits (84), Expect = 3e-06
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 24/172 (13%)

Query: 148 RQPVQQLEQS---VMSRAKLLQSEGEQL-RRLFAQAPGFVC---FLRGPR-----HVYEL 195
           RQ V+ L++    +  R   LQ+  +   R LF       C   F  GP      +V+ L
Sbjct: 10  RQQVEDLQRQNTLLEQRLASLQAHDQDFYRSLFDTMDEGFCIIEFFDGPHGPLSDYVHVL 69

Query: 196 VNDAYRQVIGHRQLLGKTIRDGLPEIEGQVLIGLLDDVYRTGQPYIGKRVSLFLKRQPER 255
            N AY +  G   ++G+ +R+ +P+ E    +     V RTG+P         L  + E 
Sbjct: 70  ANAAYAKHAGIPNVVGQKLREMVPD-EADDWVARYGAVLRTGEP---------LHFEQEL 119

Query: 256 EPEEVILDFVLQPIVENDGKVIGIFVQGQDVTEQQRNEMELRRYRDHLEELV 307
                +L      I   + + + +  +  DVTE++R E  L+R  + LE+ V
Sbjct: 120 IATGHVLSVTTFRIEPAEKRQVAVLFK--DVTERRRAEQALQRLNEELEQRV 169