Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 1809 a.a., AAA family ATPase from Paraburkholderia sabiae LMG 24235

 Score =  145 bits (365), Expect = 2e-38
 Identities = 113/353 (32%), Positives = 167/353 (47%), Gaps = 20/353 (5%)

Query: 332  DLAGEKRRYERMVDGLPDGVLMLR-QGRIHYANAAARRL-------LAGDPLQPLDAQPF 383
            DL   + R  R+VD    G+++    G I  AN A  R+       L    ++  D  P 
Sbjct: 1466 DLTEREARIRRLVDANIIGIIVWNANGDILEANDAFLRMVGYEREDLVSGRIRWRDLTP- 1524

Query: 384  IEFVAEHQRARETARLAALQRGAAAGQPQRLLLVCRDGQPFEAEVSETLLPADGDAEVQL 443
                 E Q   + A     + G    QP     + +DG      V      +     V  
Sbjct: 1525 ----QEWQETTQDALAQIFRTGRV--QPSEKEYIRKDGSRVPVMVGRVAFESSRKEGVAF 1578

Query: 444  LIRDVSQAEQLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHLQ 503
            ++ D+S+ +++   L ++ + L+ L+ R    +E ER+ +AR++HD++GQHLT L+L L 
Sbjct: 1579 VV-DLSERKEVEHRLRESYEMLRELTSRRETAREEERKRIAREMHDELGQHLTALRLRLS 1637

Query: 504  RLIRRQAGDS-EFERLSQPLVASMDAALAKVRSLSLSLHPLQLETLGLEAAVRWHLQHFL 562
             L  +   D  +    +Q LV+ +D  +  VR +  SL P  L+T G+ AA+ W    F 
Sbjct: 1638 ALKMKLYTDCPKLVEQTQALVSLVDQTMQVVRGVITSLRPAALDT-GIVAALEWLAAEFN 1696

Query: 563  EASGTCWELEVRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELRLE 622
                    L V      +   RA+  FRLVQEA+ NV+RHA+A TV I +    +   LE
Sbjct: 1697 RNRRIECRLLVHDENIAMDEDRAIVLFRLVQEALTNVSRHAKATTVVITLERTANAYLLE 1756

Query: 623  ILDDGRGFDVPEALQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALLP 675
            + DDG GFDV  A +  +S GL  M ERV   GG + I S PG G  I A LP
Sbjct: 1757 VRDDGEGFDVQAARK--KSFGLVGMEERVLMLGGQIEIVSSPGAGAVIKASLP 1807