Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 1040 a.a., EAL domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score = 89.0 bits (219), Expect = 1e-21
 Identities = 101/438 (23%), Positives = 189/438 (43%), Gaps = 46/438 (10%)

Query: 52  ESSYTLRIAAFVLFTALGIWWYTRRLADGVIRSQKLVGRA----ENSYRMLFDRHPAPMW 107
           +S Y +      +    G+  YT    + V R +  + RA    +  +R LF++HP PM+
Sbjct: 180 DSRYAMLFLVVTMLAGGGLLIYTFGARENVAREKLRIARALHRNDERFRGLFEQHPVPMY 239

Query: 108 LFDKRTLSIVRGNRQAVAAYGYSAGEFAELEILDLYAAHERERLEALAQ-----PVTPQQ 162
           +FD+ TL  +  N  AV  YGYS  EF  + +  +    E  RLE   Q     P  P+ 
Sbjct: 240 IFDRDTLRFLAVNTAAVQQYGYSESEFLAMTVRAIRPHSEVTRLETHLQRSDVTPGGPRT 299

Query: 163 LAGLRQHVARDGRELNVEVLCSALDIDESPFALLMAQEVSAHFQTETQLASALRKLE-LA 221
           +AG+  H  +DG +++ ++   A+     P   ++A +V+     E +   + + LE + 
Sbjct: 300 MAGVWHHRRKDGSQISADISYHAMTFMGRPALFVLADDVTEQINAEAEAQRSNQMLETVI 359

Query: 222 RHLAQMAYWQ----RLPGSEQVDWSPEIG-----DVLGIANAGALSWTAFLDYLHPDDRP 272
            ++ Q  +W+    R  G     ++ + G      V+G  +   + W  F + L   D  
Sbjct: 360 DNIPQRIFWKDKELRYLGCNMA-FARDAGLAYPEQVIGKRDED-MPWRGFAEGLARQDTE 417

Query: 273 AVAAAHERAERHGSLAHEFRVLGANGEQRWMFERIQLL---GRQRALFGALMDVTELKAG 329
            +A+   +      + +E  ++     +  +  ++      GR   + G+  D+TE K  
Sbjct: 418 VMASGVPK------MNYETDIVIDGVHRTTVTSKLPFTDSDGRVIGVLGSYTDITERK-- 469

Query: 330 EGDLAGEKRRYERMVDGLPDGVLMLRQGR----IHYANAAARRLLAGDPLQPLDAQPFIE 385
             DLA   R   R +D   + +L+    +    I Y N A +R+   DP + +       
Sbjct: 470 RADLA--LRLQSRALDASVNAILITGPSKEGNLIEYVNPAFKRITGYDPQEVIGQD--CR 525

Query: 386 FVAEHQRARETARLAALQRGAAAGQPQRLLL--VCRDGQPFEAEVSETLLP-ADGDAEVQ 442
            +  + R +E   +AA+++  AA +    +L    +DG  F  ++    +P ADG     
Sbjct: 526 LLQRNDRDQE--GIAAIRQALAANREVSAVLRNYRKDGALFWNQLYIAPVPDADGQTTHH 583

Query: 443 L-LIRDVSQAEQLRRDLE 459
           + +I DV+   + +  LE
Sbjct: 584 IAVINDVTALIRYQEQLE 601



 Score = 30.8 bits (68), Expect = 3e-04
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 40/127 (31%)

Query: 431 TLLPADGDAEVQLLIRDVSQAEQLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDD 490
           +L P DGD            AE L +  + A  R + + +   +  + E    A      
Sbjct: 731 SLFPQDGD-----------DAETLMKKADLAMYRAKDMGRNTFQFYQPEMNVSA------ 773

Query: 491 VGQHLTGLKLHLQRLIRRQAGDSEFERLSQPLVASMDAALAKVRSLSLSLHPLQLETLGL 550
                 G +L+L+R +RR   D+EF    QP V   D    +V              +G+
Sbjct: 774 ------GARLNLERRLRRALRDNEFLLHYQPQV---DIETGQV--------------VGM 810

Query: 551 EAAVRWH 557
           EA VRWH
Sbjct: 811 EALVRWH 817