Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 500 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Escherichia coli ECOR27

 Score =  125 bits (315), Expect = 4e-33
 Identities = 86/235 (36%), Positives = 126/235 (53%), Gaps = 8/235 (3%)

Query: 443 LLIRDVSQAEQLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHL 502
           LL   + +  +L + L+    R QHL++RL+E +E  RR+VAR+LHDD+GQ +T ++   
Sbjct: 268 LLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQ- 326

Query: 503 QRLIRRQAGDSEFERLSQPLVASMDAAL-AKVRSLSLSLHPLQLETLGLEAAVRWHLQHF 561
             +++R A D+   + S  L+  +   +   VR L   L P QL+ L LE A+R  ++  
Sbjct: 327 AGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLSLEQAIRSLMREM 386

Query: 562 -LEASGTCWELEVRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELR 620
            LE  G    LE R   + +   + V  FR+ QE +NN+ +HA A  V +     +  L 
Sbjct: 387 ELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLM 446

Query: 621 LEILDDGRGFDVPEALQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALLP 675
           L I DDG G  +P    G Q  GLT M ERV + GG L IS L   GTR++  LP
Sbjct: 447 LVIEDDGSG--LPPG-SGQQGFGLTGMRERVTALGGTLHISCL--HGTRVSVSLP 496