Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 488 a.a., PAS domain-containing protein from Dickeya dianthicola ME23

 Score =  112 bits (280), Expect = 4e-29
 Identities = 76/232 (32%), Positives = 123/232 (53%), Gaps = 6/232 (2%)

Query: 446 RDVSQAEQLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHLQRL 505
           RD++      + LED++ +L+ L+++    +E ER+ +AR++HD++GQHLT +++ L  L
Sbjct: 257 RDITAMRYAEKKLEDSHMQLRLLARQREISREEERKHIAREIHDELGQHLTSMRMSLS-L 315

Query: 506 IRRQAGDSEFERLS--QPLVASMDAALAKVRSLSLSLHPLQLETLGLEAAVRWHLQHFLE 563
           +R Q        L+  Q L+A  D  +  VR ++  L P  L+ +GL  A+ W    F+ 
Sbjct: 316 MRMQFARDNPHMLTQLQNLMALSDKTIQVVRYVATRLRPNVLD-MGLTPALEWLRDDFIR 374

Query: 564 ASGTCWELEVRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELRLEI 623
                  L+       +    A AAFR+VQE++ N+AR+A A  V I +   E  + L +
Sbjct: 375 QYRCPCLLQAPEPEVTLNDECATAAFRVVQESLTNIARYAEATQVAISLENREGLIVLSV 434

Query: 624 LDDGRGFDVPEALQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALLP 675
            D+G+GFD     +   + GL SM ER    GG++ I S PG GT +    P
Sbjct: 435 RDNGKGFDA--HARKPHAFGLMSMKERGRMLGGEVVIESQPGTGTLVRLTFP 484