Pairwise Alignments

Query, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 504 a.a., signal transduction histidine-protein kinase/phosphatase UhpB from Dickeya dianthicola ME23

 Score =  116 bits (290), Expect = 3e-30
 Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 8/237 (3%)

Query: 443 LLIRDVSQAEQLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHL 502
           LL   + +  +L   L++   R + L++RL+  +E  RR+VAR+LHDD+GQ +T ++   
Sbjct: 269 LLGAGIQRLRELNLSLQNQLARNRRLAERLLATEEYVRRDVARELHDDIGQTITAIRTQA 328

Query: 503 QRLIRRQAGDSEFERLSQPLVASMDAAL-AKVRSLSLSLHPLQLETLGLEAAVRWHLQHF 561
             +++R A +    R S  L+  +   +   VR L   L P QL+ L LE AVR  ++  
Sbjct: 329 S-ILQRLAPEHRGVRQSGALIEQLSLGVYDSVRRLMGRLRPRQLDDLTLEQAVRSLMREM 387

Query: 562 -LEASGTCWELEVRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELR 620
            LEA G    L        +  G  V  FR+ QE +NN+ +HA A  V +     +  L 
Sbjct: 388 ELEAHGIISHLAWHVDEASLGEGLRVTLFRVCQEGLNNIVKHANASAVTLQAWQQDGRLT 447

Query: 621 LEILDDGRGFDVPEALQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALLPAP 677
           L I DDG G  +P    GA+  GL  M ERV + GG L++S     GTR+T  LP P
Sbjct: 448 LVIEDDGGG--LPPG-SGAEGFGLLGMRERVTALGGTLQLSCT--HGTRLTVSLPLP 499