Pairwise Alignments

Query, 361 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  100 bits (250), Expect = 7e-26
 Identities = 69/262 (26%), Positives = 141/262 (53%), Gaps = 14/262 (5%)

Query: 40  LRPPAPAQQANLEPVSAPAAPTSTAVEALLLAVVPTWRSNVDQVRQVQQGSVGELFSRFA 99
           LR      +  ++ +S  ++  ++A E L +    + R    Q  +++Q +   +    A
Sbjct: 250 LRSMQERLRGTIQSISHSSSQLASAAEQLNVVTEDSTRGMNQQSHEIEQAATA-VNEMTA 308

Query: 100 GMTQRLQQTLNTSEAVVGGNGMASSLRHARDQLNVVTGAFHTASERKAALLGTIGELNQH 159
            + +  +  + TSEA    +  A   +H R+Q   V     +  +    +  T  E+ + 
Sbjct: 309 AVDEVARNAVATSEASRDSDATA---QHGRNQ---VIRTVDSIGQLAGDVTQTSAEVERL 362

Query: 160 ASELQNMSRL---VQDIARQTNLLALNAAIEAARAGDYGRGFSVVADEVRKLSTLSAETG 216
           A++++++S++   ++ IA QTNLLALNAAIEAARAGD GRGF+VVADEVR L+  + ++ 
Sbjct: 363 AAQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQST 422

Query: 217 HDMDQKVGEINQAISATVSAAEELSNTEQSNLHYLDEVTGEVMQGLSASLEELADTSLLL 276
            +++Q +G+++Q     V A  ++SN        L    GE ++ ++A++ ++++ +L++
Sbjct: 423 QEIEQMIGDVHQGTDRAVQAM-QVSNERARTTLDLARAAGEALEEIAAAISQISERNLVI 481

Query: 277 ---QQDTRHTQADIEEIVVNLQ 295
               ++      +++  +VN++
Sbjct: 482 ASASEEQAQVAREVDRNLVNIR 503



 Score = 32.3 bits (72), Expect = 3e-05
 Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 10/157 (6%)

Query: 187 EAARAGDYGRGFSVVA-DEVRKLSTLSAETGHDMDQKVGEINQAISATVSAAEELSNTEQ 245
           E   +GD  R   +V  DE  +L T        +   +  I+ + S   SAAE+L+   +
Sbjct: 224 EVVASGDLTRHIDIVGRDEPARLLTALRSMQERLRGTIQSISHSSSQLASAAEQLNVVTE 283

Query: 246 SNLHYLDEVTGEVMQG------LSASLEELADTSLLLQQDTRHTQADIEEIVVNLQFQDR 299
            +   +++ + E+ Q       ++A+++E+A  ++   + +R + A  +          R
Sbjct: 284 DSTRGMNQQSHEIEQAATAVNEMTAAVDEVARNAVATSEASRDSDATAQH---GRNQVIR 340

Query: 300 TDQMLDHLQQDMQRLHEAVDRQDSAVLDPHRWLRELR 336
           T   +  L  D+ +    V+R  + V D  + L  +R
Sbjct: 341 TVDSIGQLAGDVTQTSAEVERLAAQVRDISKVLDVIR 377