Pairwise Alignments
Query, 748 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2
Subject, 1646 a.a., signal transduction histidine kinase CheA/CheY-like receiver from Pseudomonas putida KT2440
Score = 226 bits (577), Expect = 6e-63
Identities = 129/336 (38%), Positives = 188/336 (55%), Gaps = 26/336 (7%)
Query: 389 QIREAALKLRMIEIGDTFNRFHRVVRDVSQQLGKDIRLEIQGADTELDKAVIDRLADPLT 448
Q++E M+ R RVVR V+ +LGK + L + A+ ELD++V++R+ PL
Sbjct: 1167 QLQEGLTATLMVPFERLVPRLQRVVRQVASELGKQVELVVGNAEGELDRSVLERMVAPLE 1226
Query: 449 HLVRNAIDHGIEPAEQRLAAGKPAEGHLRLDAYHESGMIVIEVADDGRGLNTQRIREKAI 508
H++RNA+DHG+E RLAAGKP +G + L+ HE IVIE+ DDG G+ + +R KAI
Sbjct: 1227 HMLRNAVDHGLESRAMRLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRRKAI 1286
Query: 509 ARGLIDAQANLSDHDVQMLIFAAGFSTADNVSDLSGRGVGMDVVRSAIDALRGTIEIDSR 568
RGL+D QA LSDH++ I GFSTA+ ++ +SGRG+GMDVV + L G++ I+S
Sbjct: 1287 KRGLLDPQAQLSDHEILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESA 1346
Query: 569 PGAGCTFRIRLPLTLAIIDGFLISLGDDYFVIPLDMVTECL-----ELEA-DQLDGAAYG 622
G G F IRLP T++I ++ LG++ + IPL+ + + EL A QLD Y
Sbjct: 1347 QGKGARFLIRLPFTVSINRALMVHLGEEQYAIPLNTIEGIVRVPPAELAACYQLDSPRYV 1406
Query: 623 YLD-----------LRGRPLPCLSLAAHFKLREAPSKRRNIIVVSHGRQQAGLIVDHLHG 671
Y L+G P P L S +++V Q + D L
Sbjct: 1407 YAGHEYELRYLGELLQGLPRPALL---------GQSVPLPVLLVHSKEQSFAIQADSLSP 1457
Query: 672 ELQTVIKPLGQLFQHLQGIGGSTILGSGQVALILDI 707
+ V+K LG F + G+ G+T+LG G+V LILD+
Sbjct: 1458 SREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILDL 1493
Score = 50.8 bits (120), Expect = 6e-10
Identities = 103/457 (22%), Positives = 165/457 (36%), Gaps = 59/457 (12%)
Query: 9 QLLLSFVEEARDLAKQAEEYLLQLEQTPTDEDAINGLFRAMHTLKGSAGLFSLTPLVNFT 68
QL+ SF+ A D+ AE L + +Q P DA++ L M TL +A L L + +
Sbjct: 716 QLVASFLAHAMDILLDAETLLSRWQQQPGQRDALDNLLDQMTTLGHAAHLADLWQMDDVC 775
Query: 69 HHLESLLMKVREGQQALTPVLLDLLLRGLDEINAMVELIDADSGELPVDEA--RHAGLIA 126
L L V EG R + + M++ + A P E R L+
Sbjct: 776 EALLDLYGAVEEGSLPADARFFSQAQRAHEALLDMLDEVAAGQDIPPRPELVDRLRNLLD 835
Query: 127 ALTSHEVSPLIPLTVIEPDACKAFGRLDKCANCDQEAAWHISL---RLQPEILAN-GFDP 182
+ + + L+ + + P + D + + + L LQP++ +P
Sbjct: 836 QALAPDATGLVGIDTVTP------------LHPDMDLSDTLGLPRPPLQPQVAEPLAEEP 883
Query: 183 ASFLRYLSRLGDILQLELIDDALPALA--DIDPESCYL--GMEIDLCTTASKAEIEEV-- 236
S L + ++++ A ALA DP S + DL T A + E+
Sbjct: 884 ESPGEELLEVFLEESSDIVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITP 943
Query: 237 -------FEFIREFCTLRILPPNAALEDYLQLIHDLPETDQKIGRILVASGLLTELELDQ 289
EF+ E LPP+A L LQ HD + +L + L Q
Sbjct: 944 IGDLAHELEFLYELLAAGRLPPSAPLFALLQNCHDR------------LAHMLDAVRLGQ 991
Query: 290 ALRLQAADAQQPRPLGSVLVEQGMVPAQGVNAALAKQQTVREKRNQEHSQIRVAAHKLDE 349
L A R S + QG A + ++V A LD+
Sbjct: 992 PLHAATALIDYIRNFSSAALTDS-AAGQGPPEAATAEIPAAAPERAPGDMVKVDAELLDD 1050
Query: 350 LINLVGELVISAAGAQLRAQLKGDAACIESTQTVNLHVEQIREAALKL----------RM 399
L NL GE S ++ Q+ + +T +E++R+ L+L R
Sbjct: 1051 LGNLAGE--HSIIRGRIEQQVNDAQFALNEMETT---LERMRDQLLRLDVETQGRISSRQ 1105
Query: 400 IEIGDTFNRFHRVVRDVSQQLGKDIRLEIQGADTELD 436
GD ++ F + D QL + R + A LD
Sbjct: 1106 QFEGDAYDDFDPLEMDRHSQLQQLSRALFESASDLLD 1142
Score = 44.7 bits (104), Expect = 4e-08
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 14 FVEEARDLAKQAEEYLLQLEQTPTDEDAINGLFRAMHTLKGSAGLFSLTPLVNFTHHLES 73
F++EA +L + E + L+ +A+ + RA+HTLKGS + + E
Sbjct: 445 FLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAELAWGAEH 504
Query: 74 LLMKVREGQQALTP---VLLDLLLRGLDEINAMVELIDADSGELP--VDEARHAGLIAAL 128
LL +V EG+ L+P V L + L ++ L D +G+LP + + AG + +L
Sbjct: 505 LLNRVLEGRSVLSPEGVVALQQVFVHLPDL-----LADFAAGQLPQLTEIEQLAGHLHSL 559
Query: 129 TSHEVSPLIPLTVIEPDACKAF 150
++ + ++P F
Sbjct: 560 AENDAPAAAGVDGLDPQLLGIF 581
Score = 38.9 bits (89), Expect = 2e-06
Identities = 81/348 (23%), Positives = 138/348 (39%), Gaps = 39/348 (11%)
Query: 9 QLLLSFVEEARDLAKQAEEYLLQL--EQTPTDEDAINGLFRAMHTLKGSAGLFSLTPLVN 66
QLL F EA+ E YL TP +D L RA+HTLKGSA + + P+
Sbjct: 576 QLLGIFRSEAQGHLASLEVYLQSTGGHDTPVSDD----LQRALHTLKGSAAMAGVMPVAE 631
Query: 67 FTHHLESLLMKVREGQQALTPVLLD-------LLLRGLDEINAMVELIDADSGELPVDEA 119
+ L + + Q L ++ L GL ++++ + EL +++
Sbjct: 632 LATAFDRLAREYKGHQLPLQMAEMEWLEAARSLFHLGLAQLDSTPLAAIPGAAEL-IEQV 690
Query: 120 RHAGLIAALTSHEVSPLIPLTVIEPDACKAF--GRLDKCANCDQEAAWHISLRLQPEILA 177
A + HE + +P +F +D + + + Q + L
Sbjct: 691 GQAVDRRLASLHEDPHHAGRSKRDPQLVASFLAHAMDILLDAETLLSRWQQQPGQRDALD 750
Query: 178 NGFDPASFLRYLSRLGDILQLELIDDALPALADI--DPESCYLGMEIDLCTTASKAEIEE 235
N D + L + + L D+ Q+ DD AL D+ E L + + A +A E
Sbjct: 751 NLLDQMTTLGHAAHLADLWQM---DDVCEALLDLYGAVEEGSLPADARFFSQAQRAH-EA 806
Query: 236 VFEFIREFCTLRILPPNAALEDYLQLIHD---LPETDQKIGRILVASGLLTELELDQALR 292
+ + + E + +PP L D L+ + D P+ +G I + L +++L L
Sbjct: 807 LLDMLDEVAAGQDIPPRPELVDRLRNLLDQALAPDATGLVG-IDTVTPLHPDMDLSDTLG 865
Query: 293 L-------QAAD--AQQPRPLG----SVLVEQGMVPAQGVNAALAKQQ 327
L Q A+ A++P G V +E+ + AALA+ Q
Sbjct: 866 LPRPPLQPQVAEPLAEEPESPGEELLEVFLEESSDIVESAAAALARWQ 913
Score = 26.9 bits (58), Expect = 0.009
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 49 MHTLKGSAGLFSLTPLVNFTHHLESLLMKVREGQQALTPVLLDLLLRGLDEINAMVELID 108
+H + G + L LE + +GQ + L L RGL+++ + +E +
Sbjct: 53 LHQVHGCLRMLELRGATRLAEELELFARALADGQVSPRGDCLGALFRGLEQLPSYLERLR 112
Query: 109 ADSGELPVDEARHAGLIAALTSHEVSPLIPLTVIEPDACKAFGRLDKCANCD 160
+LP+ + A E PL +++ A + F D AN D
Sbjct: 113 GARHDLPLVMLPLLNQLRACRGEE--PLAQASLM-TGAAQRFAGDDDLANLD 161