Pairwise Alignments

Query, 748 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2

Subject, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

 Score =  329 bits (843), Expect = 4e-94
 Identities = 235/750 (31%), Positives = 374/750 (49%), Gaps = 63/750 (8%)

Query: 9   QLLLSFVEEARDLAKQAEEYLLQLEQTPTDEDAINGLFRAMHTLKGSAGLFSLTPLVNFT 68
           ++L  F+ EA ++ +Q  E L++LE  P D D +N +FR  HT+KG AG   L  LV   
Sbjct: 8   EILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVECC 67

Query: 69  HHLESLLMKVREGQQALTPVLLDLLLRGLDEINAMVELIDADSGELPVDEARHAGLIAAL 128
           H  E++   +R+G++ +   L+D++L  LD +N+M   +   +   P   A    L+AAL
Sbjct: 68  HIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPA----LLAAL 123

Query: 129 TSHEVSPLIPLTVIEPDACKAFGRLDKCANCDQEAAWHISLRLQPEILANG-----FDPA 183
           +           + EP A +A          D  AA       Q + + +       D  
Sbjct: 124 SR----------LAEPGAAEAVAAPVPAPVADVVAAAPAEAEEQHQDITDSEFEQLLDSL 173

Query: 184 SFLRYLSRLGDILQLELIDDALPALADIDPESCY--------LGMEIDLCTTA------- 228
             ++  +   + +Q E +  A   + D + ES             E+     A       
Sbjct: 174 DAIKAQAAADEQMQGETVSGAGDEITDAEFESLLDQLHGKGQFNAEVAAPPVAVSSEVVS 233

Query: 229 ---SKAEIEEVFEFIREFCTLRI------------LPPNAALEDYLQLIHDLPETDQKIG 273
              + AE E + + +    T +              P N+A  D +         DQ  G
Sbjct: 234 DEITDAEFESLLDQLHGKGTFQAGALPAAQAPAPAAPDNSAASDEISEHEFEALLDQLHG 293

Query: 274 RILVASGLLTELELDQALRLQAADAQ--QPRPLGSVLVEQGMVPAQGVNAALAKQQTVRE 331
           +     G +  +E   A++ QA  A   + +P+          PA    AA        E
Sbjct: 294 KGKFG-GDVAAVEAPAAVQAQAPAAAKAESQPVAKPAAAPAPSPASKPAAAPRAPAPAAE 352

Query: 332 KR--NQEHSQIRVAAHKLDELINLVGELVISAAGAQLRAQLKGDAACIESTQTVNLHVEQ 389
           K   ++  + +RV   +LDE++N+VGELV+            GD A  ++   +++    
Sbjct: 353 KHAASEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDVVTAD 412

Query: 390 IREAALKLRMIEIGDTFNRFHRVVRDVSQQLGKDIRLEIQGADTELDKAVIDRLADPLTH 449
           ++ A +K RM  I   F RF R+VRD+++QL K+I LE+ G +T+LDK +++ LADPL H
Sbjct: 413 LQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVH 472

Query: 450 LVRNAIDHGIEPAEQRLAAGKPAEGHLRLDAYHESGMIVIEVADDGRGLNTQRIREKAIA 509
           LVRNA+DHGIE  ++R A+GK   G + L A  E   I++ ++DDG+G++   +R KA+ 
Sbjct: 473 LVRNAVDHGIEMPDEREASGKARTGRVVLSAEQEGDHILLSISDDGKGMDPNILRAKAVE 532

Query: 510 RGLIDAQA--NLSDHDVQMLIFAAGFSTADNVSDLSGRGVGMDVVRSAIDALRGTIEIDS 567
           +GL+D  A   LS+ D   LIFA GFST   +SD+SGRGVGMDVV++ I  L G+I I S
Sbjct: 533 KGLMDKDAAERLSESDCYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIFS 592

Query: 568 RPGAGCTFRIRLPLTLAIIDGFLISLGDDYFVIPLDMVTECLELEADQ---LDGAAYGYL 624
             G G    I++PLTLAI+   ++ LG+  F  PL  V E   L+  +   +DG     +
Sbjct: 593 AKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLDLSRTNVVDGQE--VV 650

Query: 625 DLRGRPLPCLSLAAHFKLREAPSKRR--NIIVVSHGRQQAGLIVDHLHGELQTVIKPLGQ 682
            +R + LP   L       +   ++   +++++S G Q+ G +VD L G+ + VIKPLG+
Sbjct: 651 IVRDKALPLFYLKRWLVQGQVHEEQHEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGK 710

Query: 683 LFQHLQGIGGSTILGSGQVALILDIPSLFR 712
           + Q   G+ G+TI G G++ALILD+PS+ +
Sbjct: 711 MLQGTPGMSGATITGDGRIALILDVPSMLK 740