Pairwise Alignments

Query, 748 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2

Subject, 762 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  222 bits (566), Expect = 5e-62
 Identities = 119/328 (36%), Positives = 190/328 (57%), Gaps = 5/328 (1%)

Query: 392 EAALKLRMIEIGDTFNRFHRVVRDVSQQLGKDIRLEIQGADTELDKAVIDRLADPLTHLV 451
           + AL  RM    D      R+VRD+ + LGK +RL ++G  T++D+ V+++L  PLTHL+
Sbjct: 287 DTALACRMRPFADVLTGQSRMVRDLGRSLGKPVRLVVEGEKTQVDRDVLEKLEAPLTHLL 346

Query: 452 RNAIDHGIEPAEQRLAAGKPAEGHLRLDAYHESGMIVIEVADDGRGLNTQRIREKAIARG 511
           RNA+DHGIE  E+RL AGKP EG +RL A H++GM+ +E+ DDG G++ +R+R   + R 
Sbjct: 347 RNAVDHGIELPERRLLAGKPDEGVIRLRASHQAGMLSLELIDDGAGIDLERLRSSIVERA 406

Query: 512 L--IDAQANLSDHDVQMLIFAAGFSTADNVSDLSGRGVGMDVVRSAIDALRGTIEIDSRP 569
           L   D  A +S+ ++   +F  GFS  D V+++SGRGVG+D V+  I  LRG+IE+    
Sbjct: 407 LSPADTVARMSEAELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHLIRELRGSIELTQVA 466

Query: 570 GAGCTFRIRLPLTLAIIDGFLISLGDDYFVIPLDMVTECLELEAD---QLDGAAYGYLDL 626
           G GC F +++PLTL+++   ++ +G + +  PL  +   LE+ A+   Q++G  + + + 
Sbjct: 467 GQGCRFHLQVPLTLSVVRSLVVEVGGEAYAFPLAHIERTLEVTAEQIVQIEGRQHFWHEG 526

Query: 627 RGRPLPCLSLAAHFKLREAPSKRRNIIVVSHGRQQAGLIVDHLHGELQTVIKPLGQLFQH 686
           R   L   S   +    ++      ++V+    Q  G+ V+ L GE   V+ PL      
Sbjct: 527 RHIGLVAASQLLNRPAGQSDEASLRVVVIREREQLYGVAVERLVGERVLVVMPLDPRLGK 586

Query: 687 LQGIGGSTILGSGQVALILDIPSLFRHL 714
           +Q I    +L  G V LI+D+  L R L
Sbjct: 587 VQDISSGALLDDGSVVLIVDVEDLLRSL 614



 Score = 56.6 bits (135), Expect = 5e-12
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 3/132 (2%)

Query: 8   SQLLLSFVEEARDLAKQAEEYLLQLEQTPTDEDAINGLFRAMHTLKGSAGLFSLTPLVNF 67
           + LL  F  EA    +     L+ LE+ PT  D +    RA H+LKG+A +  +   V+ 
Sbjct: 9   ASLLELFSLEAEAQTQVLNAGLMALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVSV 68

Query: 68  THHLESLLMKVREGQQALTPVLLDLLLRGLDEINAMVELIDADS-GELPVDEARHAGLIA 126
            H +E  L+  +EG+  LT   +D LL+G D +  +    DA +   LPV  A+ A L+ 
Sbjct: 69  AHVMEDCLVAAQEGRLRLTAEHIDALLQGTDLLMRIATPGDAGAQATLPVFLAQMASLLD 128

Query: 127 ALTSHEVSPLIP 138
              S    P++P
Sbjct: 129 PGAS--AMPVVP 138