Pairwise Alignments

Query, 548 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 533 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  313 bits (801), Expect = 1e-89
 Identities = 195/532 (36%), Positives = 315/532 (59%), Gaps = 28/532 (5%)

Query: 1   MQFFRNMKIGARLTLGFLLV---VLLTIAVGLLGIRNLSEVSGLSDLMYERDLTGIDAVH 57
           M F  N++IG RL + F +V   V+++ A  LL  R+ +E + +   M E  L   + + 
Sbjct: 1   MNFLSNLRIGTRLAVAFSVVLGLVVISTAFALLSARSNAEATRV---MMESPLAK-ERLI 56

Query: 58  SANYSLIVAGRALRGSLLATTVEARDSSAAAAQKALVDTRT-TLEKAKKSFHSDQAKALV 116
           S  Y L  +  A    +  TT E    + A      V   T T+ K +K   + + KA+ 
Sbjct: 57  SDWYVLTYSAIARTSMIARTTDETLPVTFADVISDSVKKGTETMAKVEKLLVTPEEKAIF 116

Query: 117 NRIDEPLADYERRLNEILSIHLASAELAEQSAFSELFPALSRSGETVDNLMSEAVAFRRD 176
             I E  A Y+   +E+     +   +    AF E F   +++ E+    + E ++  R 
Sbjct: 117 KSIMELRAKYQAAKDEVGKAKASGNTVETTRAFKETFQPAAKAYES---RVLELLSIERK 173

Query: 177 RAQEANAQINAIYLGSKTQMIGLILLAVVLGFIIGMLVTRSITRPLNRAVSVADSLAAGD 236
              + +A I+A    +    + L +  V +G +   L++RSI RPL RAV VA+++AAGD
Sbjct: 174 AIDDMSASIDAANARALNLSLLLAMATVAIGAVFSFLISRSIVRPLTRAVEVAETVAAGD 233

Query: 237 LGVQLEVNSKDETGRLLSSMNNMAERLRNVISDVRSAADSLSSASEEVSATSQSLSQAAS 296
           L V +   S+DETG+L+ ++ NM + L  V+ +VR+  +++++AS ++++ +  LS    
Sbjct: 234 LSVDIRAESRDETGQLMQALKNMNDSLAKVVGEVRTGTETIATASGQIASGNHDLSSRTE 293

Query: 297 EQAASVEETTASVEQMSASIAQNTESAKITDNIAGKAANDAVEGGRAVRDMVQAM----- 351
           +QA+S+E+T AS+E++++++ QN ++A+  + +A  A+  AV+GG  V  +V  M     
Sbjct: 294 QQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQVVDTMGSINA 353

Query: 352 --KQIADKIGIIDDIAYQTNLLALNAAIEAARAGDHGKGFAVVAAEVRKLAERSQVAAQE 409
             K+I D IG+ID IA+QTN+LALNAA+EAARAG+ G+GFAVVA+EVR LA+RS  AA+E
Sbjct: 354 SSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKE 413

Query: 410 IGGVASNSVQLAE-------QAGSLLDEIVPNIQKTSDLVQEITAASQEQSSGAEQINIA 462
           I  +  +SV+  E       +AG  +DEIV ++++ +D++ EITAASQEQ+SG EQIN A
Sbjct: 414 IKTLIGDSVEKVEAGSKQVAEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQA 473

Query: 463 MGQMNQITQQNASASEELAATSEEMNAQAGQLLELISFFRFD---AANTASQ 511
           + QM+Q+TQQNA+  EE +A ++ +  QAG L +++  FR +   AA TA Q
Sbjct: 474 ITQMDQVTQQNAALVEEASAAAQSLQEQAGSLSQIVGVFRLEGSRAAGTARQ 525