Pairwise Alignments

Query, 548 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 558 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  280 bits (717), Expect = 8e-80
 Identities = 198/574 (34%), Positives = 321/574 (55%), Gaps = 54/574 (9%)

Query: 5   RNMKIGARLTLGFLLVVLLTIAVGLLGIRNLSEVSGLSDLMYERDLTGIDAVHSANYSLI 64
           +N KIG RL++GF +++  ++ +   GI  L ++S  ++ + +  L     V  A++   
Sbjct: 2   KNYKIGIRLSVGFGVLIAFSLVMMASGIYQLRQISQNAEKIMQIPLQKERLV--ADW--- 56

Query: 65  VAGRALRGSLLATTVEARDSSAAAAQKALVD----TRTTLEKAKKS---FHSDQAKALVN 117
             G  L   +   T  AR S A+ AQ    D    T+   E+A K       ++ KAL++
Sbjct: 57  --GATLAAGIQRATATARSSDASLAQVFAADNANATKENNERAAKFTALVSLNEEKALLD 114

Query: 118 RIDEPLADYERRLNEILSIHLA-SAELAEQSAFSELFP---ALSRSGETVDNLMSEAV-A 172
           +++     Y +  ++I +   A +AE A+Q    +L P   A  +S   + +    ++  
Sbjct: 115 KLNIDRQAYIKARDDIFAAKAAGNAEQAKQLFEQQLQPISVAYQKSMNLLRDYQRTSIDQ 174

Query: 173 FRRDRAQEANAQINAIYLGSKTQMIGLILLAVVLGFIIGMLVTRSITRPLNRAVSVADSL 232
            R D A+ AN     ++LG      GL +L   +G ++  ++T SI +PL +AV V  ++
Sbjct: 175 MRTDIAERANNSY--LFLG------GLGVLITAIGSLLAWMLTHSIVQPLQKAVQVTHAV 226

Query: 233 AAGDLGVQLEVNSKDETGRLLSSMNNMAERLRNVISDVRSAADSLSSASEEVSATSQSLS 292
           A G+L   +    +DE  +L  ++  M  +LR V+ +VR  A++++ AS ++SA +Q LS
Sbjct: 227 ARGELTDDISPQGRDELAQLQHALQEMTAQLRTVVGEVREGAEAIADASSQLSAGNQDLS 286

Query: 293 QAASEQAASVEETTASVEQMSASIAQNTESAKITDNIAGKAANDAVEGGRAVRDMVQAM- 351
               EQ+ +++ET AS+EQ+++++ QN ++A+    +A   A+ A  GG+ V ++VQ M 
Sbjct: 287 NRTDEQSGALQETAASIEQLTSTVRQNADNARQASQLAQDTASQAQSGGQLVSEVVQTMG 346

Query: 352 ------KQIADKIGIIDDIAYQTNLLALNAAIEAARAGDHGKGFAVVAAEVRKLAERSQV 405
                 K+I D IG+ID IA+QTN+LALNAA+EAARAG+ G+GFAVVA+EVR LA+RS  
Sbjct: 347 AIDSSSKKIVDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAS 406

Query: 406 AAQEIGGVASNSVQ-------LAEQAGSLLDEIVPNIQKTSDLVQEITAASQEQSSGAEQ 458
           AA+EI  +  +SVQ       L E+AG  +  IV  ++K S+LV EI+ ASQEQS G EQ
Sbjct: 407 AAREIKELIGHSVQTVDAGNRLVEKAGVSIQGIVDGVRKVSELVGEISVASQEQSLGIEQ 466

Query: 459 INIAMGQMNQITQQNASASEELAATSEEMNAQAGQLLELISFFRFDAANTASQPL--RRP 516
           +N+A+ +M Q T QNAS   E    ++ +  QA QL +++  F  + A   +  +   RP
Sbjct: 467 VNMAINKMEQTTLQNASLVREGTTATQALQQQAEQLKQVVGIFHLEKARPDAYRVSGSRP 526

Query: 517 VPFASP-------RPAATSPRGEQRARTSVDDSQ 543
           +  ASP       +PAA+S    ++A  S DD Q
Sbjct: 527 MLAASPATKTLALKPAASS----RKASASEDDWQ 556