Pairwise Alignments

Query, 296 a.a., Geranylgeranyl pyrophosphate synthase from Pseudomonas stutzeri RCH2

Subject, 322 a.a., octaprenyl diphosphate synthase from Pseudomonas putida KT2440

 Score =  104 bits (260), Expect = 2e-27
 Identities = 87/272 (31%), Positives = 128/272 (47%), Gaps = 31/272 (11%)

Query: 38  YSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHDDLPAMDDDDLRRG 97
           Y    GGKR+RPLLV    +AL  +       A  +E +H  +L+HDD+  +D   +RRG
Sbjct: 38  YITSAGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDV--VDMSGMRRG 95

Query: 98  QPTTHKAFDEACAILAGDGLQSLAFEAMAQAAHNPQDATLRLRMFAVLARAAGPAGMVGG 157
           + T +  +  A ++L GD L S +FE M +    P        +  +L++A     +  G
Sbjct: 96  RSTANALWGNAPSVLVGDFLYSRSFEMMVELGSMP--------VMQILSKATRV--IAEG 145

Query: 158 QAIDLGSVGLKLDRDALELMH----RHKTGALIEASVQLGALASGRADADNLASLSQYAR 213
           + + L  V    D    E ++    R KT  L EAS    A A  +A  +   +L  +  
Sbjct: 146 EVLQLSRVR---DASTTEEVYMEVIRGKTAMLFEASTH-SAAALAQATDEQREALRTFGD 201

Query: 214 AIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYALELRDQA--- 270
            +G+AFQ+ DD+LD + D+ TLGK+ G D+A  KPT P +  M    A    L  QA   
Sbjct: 202 HLGVAFQLVDDLLDYKGDSQTLGKNVGDDLAEGKPTLPLIYTMREGTAEQAALVRQAIQK 261

Query: 271 --LHALRPFDIAAEP------LRELARYIVER 294
             L  L    +A E         ELAR  V+R
Sbjct: 262 GGLEDLEQIRVAVEESGALKYTAELARDYVKR 293