Pairwise Alignments

Query, 841 a.a., ATP-dependent helicase HrpB from Pseudomonas stutzeri RCH2

Subject, 842 a.a., ATP-dependent helicase HrpB from Pseudomonas putida KT2440

 Score = 1318 bits (3410), Expect = 0.0
 Identities = 677/843 (80%), Positives = 733/843 (86%), Gaps = 3/843 (0%)

Query: 1   MSLLPIESVLPALRDALSARNEVVLEAAPGAGKTTRVPIALLEEPWLADQTIVMLEPRRL 60
           M  LPI++ LPALR AL  R+EVVLEA PGAGKTTRVP+ALL EPWLA Q+I+MLEPRRL
Sbjct: 1   MISLPIDAALPALRQALENRDEVVLEAPPGAGKTTRVPLALLHEPWLAGQSILMLEPRRL 60

Query: 61  AARAAAERLASELGESVGQTVGYRIRLESKVGPQTRIEVVTEGILTRRLQDDPALDGVGL 120
           AARAAAERLASELGE VG+TVGYRIRL+SKVGP+TRIEVVTEGILTRRLQ DPAL+GVGL
Sbjct: 61  AARAAAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGL 120

Query: 121 LIFDEYHLRSLDADLALALCLNGRELLRDEPPLKVLLMSATLEGERLSRLLDEAPVVRSE 180
           LIFDE+H RSLDADLALAL LNGRELLRD+PPLK+LLMSATLEGERLSRLLD+APVV SE
Sbjct: 121 LIFDEFHERSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDDAPVVSSE 180

Query: 181 GRMYPVEQRWGRPSQIGEALEPRVVQTMLQALADEPGSLLVFLPGQAEIRRVAEQLAERL 240
           GRM+PV+ RWGRP Q GE +EPRVV  +L ALAD+ GS+LVFLPGQAEIRRV + L E L
Sbjct: 181 GRMHPVDIRWGRPFQPGEFIEPRVVDCVLHALADQAGSVLVFLPGQAEIRRVHQSLQEVL 240

Query: 241 AGRSEILLCPLHGELDLAAQRAAIEPAPAGKRKVVLATNIAETSLTIDGVRVVVDAGLER 300
             R EILLCPLHGELDL AQRAAI+P   G RKVVLATNIAETSLTIDGVRVV+DAGL R
Sbjct: 241 GARPEILLCPLHGELDLNAQRAAIDPPAKGLRKVVLATNIAETSLTIDGVRVVIDAGLAR 300

Query: 301 VPRFDPASGMTRLDTQRISRSSATQRAGRAGRLQPGACYRLWSEAQHEQLAAHGSAEILQ 360
           VPRFDP SGMTRLDTQRISR+SATQRAGRAGRL+PG CYRLWSEAQH+QLAAHGSAEILQ
Sbjct: 301 VPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEAQHDQLAAHGSAEILQ 360

Query: 361 ADLAGLALQLARWGIGDPNELAWLDPPPTAAYAQGRDLLQRLGALADDGN--LTRHGQAM 418
           ADLAGLALQLARWG+  P +L WLD PP AAYAQ +DLL RL A        L+ HGQAM
Sbjct: 361 ADLAGLALQLARWGV-TPEQLRWLDQPPAAAYAQAQDLLARLSAFRPGSRDTLSEHGQAM 419

Query: 419 AELPAHPRIAHLLLRGHALGLGGLACDLAALLGERDILRGGGADLHSRLALLAGNDKAAR 478
           AELPAHPRIAHLLLRG  LGL  +ACD+AALLGERDI RGGGADLHSRLAL++G  KAAR
Sbjct: 420 AELPAHPRIAHLLLRGQDLGLAQMACDVAALLGERDIQRGGGADLHSRLALVSGESKAAR 479

Query: 479 GARGGVQRARQLARQFRSYLRGPASEPVADPDHPRWLGCLLAFAYPDRIAQQRRAGGADY 538
           G +GGVQRARQLARQ+R  LRG    PVADPDHPRWLG LLA AYPDR+AQQRRAGGA+Y
Sbjct: 480 GGQGGVQRARQLARQYRGLLRGKVGAPVADPDHPRWLGALLALAYPDRVAQQRRAGGAEY 539

Query: 539 RLANGRAATFGEPDALMKEPWLVIADLGSRQGQREERIYLAADLDPALFDGPLAEQVRCQ 598
           RLANGRAA FGE DALMK PWLVIADLGSRQGQREERIYLAA+ DPAL +G LAEQV   
Sbjct: 540 RLANGRAALFGEVDALMKCPWLVIADLGSRQGQREERIYLAAEFDPALLEGVLAEQVERV 599

Query: 599 DLLDWEEREGVLRAERQVKVGELVLAREALAELDDEARSRALLGLVRRKGLELLPWSAEL 658
           D+LDW+ERE VLRAERQVKVGELVL+RE L  LDDEAR+RALLGLVRRKGL LL W+ EL
Sbjct: 600 DILDWDEREQVLRAERQVKVGELVLSREPLPGLDDEARTRALLGLVRRKGLNLLTWTPEL 659

Query: 659 RQWQARVALLRRLDLADTGSSEWPDLSDAALLASLEEWLQPWLGKVSRLSHFANLDLAGI 718
           RQWQARVALLR+LDL   G SEWPDL D ALLASLE+WLQP+L KVSRLSHFA LDL  +
Sbjct: 660 RQWQARVALLRQLDLQKDGHSEWPDLGDEALLASLEDWLQPYLSKVSRLSHFAALDLPSM 719

Query: 719 LHGLLPWPLPQRLDELAPRTLEVPSGSRIRLDYSDEMPVLAVRLQELFGLADTPRIAGGR 778
           L  LLPWPLPQRL+E AP  L VPSGS IRLDYS+  P+LAVRLQELFGLADTPRIA GR
Sbjct: 720 LRNLLPWPLPQRLEEQAPAHLAVPSGSNIRLDYSETPPILAVRLQELFGLADTPRIANGR 779

Query: 779 QGVKLHLLSPAQRPVQVTQDLASFWRNTYAEVKKDLRGRYPKHYWPEDPLVAQATARAKP 838
           Q VKLHLLSPA+RPVQVTQDLASFWR TYAEVKKDL+GRYPKHYWP+DPLVA+ATARAKP
Sbjct: 780 QQVKLHLLSPARRPVQVTQDLASFWRTTYAEVKKDLKGRYPKHYWPDDPLVAEATARAKP 839

Query: 839 RKS 841
           R S
Sbjct: 840 RGS 842