Pairwise Alignments

Query, 1056 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Pseudomonas stutzeri RCH2

Subject, 1082 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

 Score = 1552 bits (4019), Expect = 0.0
 Identities = 781/1059 (73%), Positives = 912/1059 (86%), Gaps = 17/1059 (1%)

Query: 1    MFERIIRFSIEHRWLVMLAVLGMAALGAYSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            MFERIIRF+IE RWL++LAV+ MA LG Y+YQKLPIDAVPDITNVQVQINT APGYSPLE
Sbjct: 1    MFERIIRFAIEQRWLILLAVVAMAGLGVYNYQKLPIDAVPDITNVQVQINTGAPGYSPLE 60

Query: 61   VEQRITYPLETVMAGLPKLEQTRSLSRYGLSQITVIFEEGTDIYFARQLVNERLGGAKDQ 120
             EQR+T+P+ETVMAGLP L QTRSLSRYGLSQ+TVIF++GTD+YFARQLVNERL  A  +
Sbjct: 61   TEQRVTFPIETVMAGLPGLLQTRSLSRYGLSQVTVIFKDGTDVYFARQLVNERLQSASGE 120

Query: 121  LPDGVTPTLGPISTGLGEIYFWTVEAEEGATKSDGTPYTPADLREIQDWIIKPQVRNVPG 180
            +P+GV P +GPISTGLGEIY WTVEA++GA K DGTPYT  DLREIQDWIIKPQ+RNV G
Sbjct: 121  MPEGVHPQVGPISTGLGEIYLWTVEAKDGAKKPDGTPYTSTDLREIQDWIIKPQLRNVAG 180

Query: 181  VTEINTIGGYAKEYQIAPNPDTLRSFGLTLQDLIEAVEQNNNNLGAGYIEKRGEQYLVRA 240
            VTEIN+IGGY K+YQIAP P+ L ++GL++ D+++A+E+NN N+GAGYIE+RGEQYL+RA
Sbjct: 181  VTEINSIGGYEKQYQIAPIPEKLSAYGLSMADVVKALERNNTNVGAGYIERRGEQYLIRA 240

Query: 241  PGQMQSVEDIRDTLISNVDGTPVRIRDVATVEVGKELRTGAATENGREVVLGTAFMLIGE 300
            PGQ + VED+R+ ++S+   TPVR+RDVA V +GKELRTGAAT+NGREVVLGT FMLIGE
Sbjct: 241  PGQARGVEDLRNIILSSNGSTPVRVRDVAEVGIGKELRTGAATDNGREVVLGTVFMLIGE 300

Query: 301  NSRVVSRAVDDKMKEINLSLPEGVKAITVYDRTVLVDKAISTVKKNLTEGAILVVVILFL 360
            NSR+VS+AV  KM +IN +LPEGV+AITVYDRTVLVDKAI+TVKKNL EGA+LV+V+LFL
Sbjct: 301  NSRIVSQAVAKKMADINRTLPEGVEAITVYDRTVLVDKAIATVKKNLLEGAVLVIVVLFL 360

Query: 361  FLGNIRAAILTALVIPLSMLFTFTGMVANQVSANLMSLGALDFGIIIDGAVVIVENCVRR 420
            FLGN+RAA++TA+VIPLSMLFTFTGMV  +VSANLMSLGALDFGIIIDGAVVIVENCVRR
Sbjct: 361  FLGNMRAAVITAMVIPLSMLFTFTGMVNQKVSANLMSLGALDFGIIIDGAVVIVENCVRR 420

Query: 421  LAHAQSHHGRALTLSERLHEVFAAAKEVRRPLLYGQLIIMIVYLPIFALTGVEGKMFTPM 480
            LAHAQ  HGR LT  ER HEVFAA++E RR LL+GQLIIMIVYLPIFALTGVEGKMF PM
Sbjct: 421  LAHAQHRHGRPLTRKERFHEVFAASQEARRALLFGQLIIMIVYLPIFALTGVEGKMFHPM 480

Query: 481  AFTVVTALFGAIILSVTFVPAAVALFIGKRVTEKENFLIRNAKRAYAPALDAVMANKPAV 540
            A TVV AL GA+ILSVTF+PAAVALFIGK+V+EKEN L+  AK+AY P L  V+  K  V
Sbjct: 481  ALTVVIALLGAMILSVTFIPAAVALFIGKKVSEKENRLMGWAKKAYEPLLVRVLEAKAVV 540

Query: 541  LTFAVVVVILSGLVGSRMGSEFVPSLNEGDFAIQALRVPATSLSQSVEMQQQLERKLMDE 600
            LT A + V+L+GL+ +R+GSEF+P+LNEGDFA+QALR+P TSLSQSV+MQQQLER L ++
Sbjct: 541  LTVAGIAVVLAGLLATRLGSEFIPNLNEGDFAVQALRIPGTSLSQSVQMQQQLERTLKEK 600

Query: 601  FPEIERIFARTGTAEVASDAMPPNISDGYVMLKPQEQWPDPGKSRNQLLSEVQASAAELP 660
            FPEI+RIFARTGTAE+ASD MPPNISD YVMLKP +QWP+P ++R +++  VQ   +++P
Sbjct: 601  FPEIDRIFARTGTAEIASDPMPPNISDAYVMLKPVDQWPEPRRTRQEVVQAVQKEVSKIP 660

Query: 661  GNNYEFSQPIQLRFNELISGVRAAVAVKIYGDDMDVLNSTAAEVSEVLGQVPGASEVTVE 720
            GNNYEFSQPIQLRFNEL+SGVRA VAVK++GDDMDVLN TA E+  VL  + GA+EV VE
Sbjct: 661  GNNYEFSQPIQLRFNELVSGVRADVAVKVFGDDMDVLNKTAREIEGVLKSISGAAEVNVE 720

Query: 721  QTTGLPMLTIDIDRDQIARYGLSLDTVQQAVAVAIGGREAGTLFQGDRRFDIVVRLPDEI 780
            QTTGLPMLT++IDRD+  RYGL++  VQ  +A AIGGR AGTLF+GDRRFDIVVRLPD +
Sbjct: 721  QTTGLPMLTVNIDRDKATRYGLNIADVQDTIATAIGGRNAGTLFEGDRRFDIVVRLPDNV 780

Query: 781  RSDLAAIERLPIALPRELNST-----------------ISYIPLGEVATLDLAPGPNQIS 823
            R DL AI+RLPIALP    +                  +++IPLGEVATL+LAPGPNQ+S
Sbjct: 781  RGDLEAIKRLPIALPASSAAADVVGATSVAGAGANAARVNFIPLGEVATLELAPGPNQVS 840

Query: 824  REEGKRRIVVSANVRGRDIGSFVSEAEQKIQAQVDIPAGYWIDWGGTFEQLESATKRLQI 883
            RE+GKRRIVVSANVRGRD+GSFVSEA   + +QV +P GYW  WGG FE L+SATKRLQI
Sbjct: 841  REDGKRRIVVSANVRGRDLGSFVSEAAGALDSQVKVPTGYWTTWGGQFENLQSATKRLQI 900

Query: 884  VVPVALLLVFILLFMMFNNVKDGLLVFTGIPFALTGGIVALWLRDIPLSISAGVGFIALS 943
            VVPVALLLVF LLF MF N+KDGL+VFTGIPFALTGGI+ALWLRDIPLSI+A VGFIALS
Sbjct: 901  VVPVALLLVFTLLFAMFGNMKDGLIVFTGIPFALTGGILALWLRDIPLSITAAVGFIALS 960

Query: 944  GVAVLNGLVMISFIRSLREQGLPLDTAIREGALTRLRPVLMTALVASLGFVPMALNVGTG 1003
            GVAVLNGLVMISFIR+LRE G  LD AI EGALTRLRPVLMTALVASLGFVPMA+  GTG
Sbjct: 961  GVAVLNGLVMISFIRNLREGGASLDHAIHEGALTRLRPVLMTALVASLGFVPMAIATGTG 1020

Query: 1004 AEVQRPLATVVIGGILSSTVLTLLVLPLLYQMAHRREDE 1042
            AEVQ+PLATVVIGGILSST LTLLVLP+LY++AH R++E
Sbjct: 1021 AEVQQPLATVVIGGILSSTALTLLVLPVLYRLAHGRDEE 1059